RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-240ENST00000602263 SLC1A1P43005 524 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 LEPRP48357 1165 aaKnown RBP10.28□□□□□ -0.76
FARP1-240ENST00000602263 DRG2P55039 364 aaKnown RBP10.28□□□□□ -0.76
FARP1-240ENST00000602263 SH3BP2P78314 561 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 GPR18Q14330 331 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 TEX44Q53QW1 395 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 COLEC12Q5KU26 742 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 ATP1A1-AS1Q5TC04 95 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 CACHD1Q5VU97 1274 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 ZDHHC20Q5W0Z9 365 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 IRGCQ6NXR0 463 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 KLHL35Q6PF15 583 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 NPNTQ6UXI9 565 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 WASH2PQ6VEQ5 465 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 FAM92BQ6ZTR7 304 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 PPP1R3BQ86XI6 285 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 ZNF547Q8IVP9 402 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 RHOT2Q8IXI1 618 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 GALNT6Q8NCL4 622 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 OR8K1Q8NGG5 319 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 SPATA22Q8NHS9 363 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 SLC35G2Q8TBE7 412 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 RSC1A1Q92681 617 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 ELMO2Q96JJ3 720 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 OLFM3Q96PB7 478 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 TRABDQ9H4I3 376 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 BPIFA1Q9NP55 256 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 PDE7BQ9NP56 450 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 WASH6PQ9NQA3 447 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 DDX56Q9NY93 547 aaKnown RBP10.28□□□□□ -0.76
FARP1-240ENST00000602263 TRIM10Q9UDY6 481 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 POLHQ9Y253 713 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 MRPS18BQ9Y676 258 aaKnown RBP10.28□□□□□ -0.76
FARP1-240ENST00000602263 SLC30A1Q9Y6M5 507 aa10.28□□□□□ -0.76
FARP1-240ENST00000602263 SPENQ96T58 3664 aaKnown RBP10.28□□□□□ -0.76
FARP1-240ENST00000602263 USP9YO00507 2555 aaPredicted RBP10.28□□□□□ -0.76
FARP1-240ENST00000602263 USP9XQ93008 2570 aaPredicted RBP10.27□□□□□ -0.76
FARP1-240ENST00000602263 MED13Q9UHV7 2174 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 PRR19A6NJB7 356 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 C3orf70A6NLC5 250 aaPredicted RBP10.27□□□□□ -0.77
FARP1-240ENST00000602263 MKRN2OSH3BPM6 223 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 MTSS1O43312 755 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 CBFA2T2O43439 604 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 FGF5P12034 268 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 TNNT1P13805 278 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 BRAFP15056 766 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 ZNF28P17035 718 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 PTPN3P26045 913 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 HMGCLP35914 325 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 SPAM1P38567 509 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 NR2C2P49116 596 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 ARL4DP49703 201 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 FOXK1P85037 733 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 TMEM115Q12893 351 aaPredicted RBP10.27□□□□□ -0.77
FARP1-240ENST00000602263 KLRB1Q12918 225 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 TFDP2Q14188 446 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 ERV3-1Q14264 604 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 PLCL1Q15111 1095 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 PPP2R5EQ16537 467 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.27□□□□□ -0.77
FARP1-240ENST00000602263 ATP13A5Q4VNC0 1218 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 LDLRAP1Q5SW96 308 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 LRRC38Q5VT99 294 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 AMZ2Q86W34 360 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 RHOT1Q8IXI2 618 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 TFB1MQ8WVM0 346 aaKnown RBP10.27□□□□□ -0.77
FARP1-240ENST00000602263 UBXN4Q92575 508 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 RNF25Q96BH1 459 aaPredicted RBP10.27□□□□□ -0.77
FARP1-240ENST00000602263 TADA1Q96BN2 335 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 RNF31Q96EP0 1072 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 DNAJC7Q99615 494 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 RAB33BQ9H082 229 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 SLC40A1Q9NP59 571 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 UBP1Q9NZI7 540 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.27□□□□□ -0.77
FARP1-240ENST00000602263 HACD3Q9P035 362 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 KLHL8Q9P2G9 620 aaPredicted RBP10.27□□□□□ -0.77
FARP1-240ENST00000602263 EPHA6Q9UF33 1036 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 FAM153AQ9UHL3 310 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 PADI1Q9ULC6 663 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 SPO11Q9Y5K1 396 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 PIKFYVEQ9Y2I7 2098 aa10.27□□□□□ -0.77
FARP1-240ENST00000602263 TNRC6AQ8NDV7 1962 aaKnown RBP10.26□□□□□ -0.77
FARP1-240ENST00000602263 CDC14CA4D256 554 aa10.26□□□□□ -0.77
FARP1-240ENST00000602263 AURKAO14965 403 aa10.26□□□□□ -0.77
FARP1-240ENST00000602263 SPOPO43791 374 aa10.26□□□□□ -0.77
FARP1-240ENST00000602263 KIF1CO43896 1103 aaKnown RBP10.26□□□□□ -0.77
FARP1-240ENST00000602263 SPAG6O75602 509 aa10.26□□□□□ -0.77
FARP1-240ENST00000602263 NELFEP18615 380 aaKnown RBP10.26□□□□□ -0.77
FARP1-240ENST00000602263 F8A1P23610 371 aa10.26□□□□□ -0.77
FARP1-240ENST00000602263 WNT3AP56704 352 aa10.26□□□□□ -0.77
FARP1-240ENST00000602263 TUBB3Q13509 450 aa10.26□□□□□ -0.77
FARP1-240ENST00000602263 DNASE1L3Q13609 305 aa10.26□□□□□ -0.77
FARP1-240ENST00000602263 ITGA9Q13797 1035 aa10.26□□□□□ -0.77
FARP1-240ENST00000602263 PRKD1Q15139 912 aaPredicted RBP10.26□□□□□ -0.77
FARP1-240ENST00000602263 ASTE1Q2TB18 679 aaPredicted RBP10.26□□□□□ -0.77
FARP1-240ENST00000602263 KHDC1Q4VXA5 237 aaKnown RBP10.26□□□□□ -0.77
FARP1-240ENST00000602263 FAM182AQ5T1J6 154 aa10.26□□□□□ -0.77
FARP1-240ENST00000602263 B4GALNT4Q76KP1 1039 aa10.26□□□□□ -0.77
FARP1-240ENST00000602263 GLT6D1Q7Z4J2 308 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms