RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 GPR33Q49SQ1 333 aa16.91■□□□□ 0.3
HERC3-214ENST00000601319 FBXO39Q8N4B4 442 aa16.91■□□□□ 0.3
HERC3-214ENST00000601319 OR10G6Q8NH81 332 aa16.91■□□□□ 0.3
HERC3-214ENST00000601319 DCBLD2Q96PD2 775 aa16.91■□□□□ 0.3
HERC3-214ENST00000601319 SLC38A3Q99624 504 aa16.91■□□□□ 0.3
HERC3-214ENST00000601319 SEMA6CQ9H3T2 930 aa16.91■□□□□ 0.3
HERC3-214ENST00000601319 ASB8Q9H765 288 aa16.91■□□□□ 0.3
HERC3-214ENST00000601319 PRDM8Q9NQV8 689 aa16.91■□□□□ 0.3
HERC3-214ENST00000601319 NLE1Q9NVX2 485 aaPredicted RBP16.91■□□□□ 0.3
HERC3-214ENST00000601319 LOXL2Q9Y4K0 774 aa16.91■□□□□ 0.3
HERC3-214ENST00000601319 PCDHGA7Q9Y5G6 932 aa16.91■□□□□ 0.3
HERC3-214ENST00000601319 LOC400499M0QZD8 3231 aa16.91■□□□□ 0.3
HERC3-214ENST00000601319 IGHV5-10-1A0A0J9YXX1 117 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 MROH6A6NGR9 719 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 TNFSF15O95150 251 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 IFNB1P01574 187 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 FGGP02679 453 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 MSH3P20585 1137 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 ITGALP20701 1170 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 IDSP22304 550 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 AKT1P31749 480 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 ABCG1P45844 678 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 CTSCP53634 463 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 LIMK2P53671 638 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 CDH17Q12864 832 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 SNX1Q13596 522 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 BCL7AQ4VC05 210 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 PHF19Q5T6S3 580 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 WDR74Q6RFH5 385 aaPredicted RBP16.9■□□□□ 0.3
HERC3-214ENST00000601319 C4orf22Q6V702 233 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 ZNF574Q6ZN55 896 aaPredicted RBP16.9■□□□□ 0.3
HERC3-214ENST00000601319 LRRC69Q6ZNQ3 347 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 SNX20Q7Z614 316 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 AMZ2Q86W34 360 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 NXPE1Q8N323 547 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 CCDC89Q8N998 374 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 HEXDCQ8WVB3 486 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 DNAJC1Q96KC8 554 aaKnown RBP16.9■□□□□ 0.3
HERC3-214ENST00000601319 CMKLR1Q99788 373 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 ETNK1Q9HBU6 452 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 HOMER3Q9NSC5 361 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 POT1Q9NUX5 634 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 PAK5Q9P286 719 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 PDP2Q9P2J9 529 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 ACSL6Q9UKU0 697 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 DRG1Q9Y295 367 aaKnown RBP16.9■□□□□ 0.3
HERC3-214ENST00000601319 DNAJC16Q9Y2G8 782 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 JRKLQ9Y4A0 524 aa16.9■□□□□ 0.3
HERC3-214ENST00000601319 IGLV3-16A0A075B6K0 115 aa16.89■□□□□ 0.29
HERC3-214ENST00000601319 TRBV23OR9-2A0A075B6M9 112 aa16.89■□□□□ 0.29
HERC3-214ENST00000601319 TRBV5-4A0A0C4DH59 114 aa16.89■□□□□ 0.29
HERC3-214ENST00000601319 PDZK1P1A8MUH7 402 aa16.89■□□□□ 0.29
HERC3-214ENST00000601319 THRAP10827 490 aa16.89■□□□□ 0.29
HERC3-214ENST00000601319 BRAFP15056 766 aa16.89■□□□□ 0.29
HERC3-214ENST00000601319 CFHR1Q03591 330 aa16.89■□□□□ 0.29
HERC3-214ENST00000601319 POU6F1Q14863 301 aa16.89■□□□□ 0.29
HERC3-214ENST00000601319 C16orf72Q14CZ0 275 aa16.89■□□□□ 0.29
HERC3-214ENST00000601319 USP53Q70EK8 1073 aa16.89■□□□□ 0.29
HERC3-214ENST00000601319 ZNF761Q86XN6 746 aaPredicted RBP16.89■□□□□ 0.29
HERC3-214ENST00000601319 RBM12BQ8IXT5 1001 aaKnown RBP16.89■□□□□ 0.29
HERC3-214ENST00000601319 STYXQ8WUJ0 223 aa16.89■□□□□ 0.29
HERC3-214ENST00000601319 CCDC97Q96F63 343 aaPredicted RBP16.89■□□□□ 0.29
HERC3-214ENST00000601319 CCDC74BQ96LY2 380 aa16.89■□□□□ 0.29
HERC3-214ENST00000601319 B3GNT4Q9C0J1 378 aa16.89■□□□□ 0.29
HERC3-214ENST00000601319 EIF2B3Q9NR50 452 aaKnown RBP16.89■□□□□ 0.29
HERC3-214ENST00000601319 RAB6BQ9NRW1 208 aa16.89■□□□□ 0.29
HERC3-214ENST00000601319 AKAP7Q9P0M2 348 aaPredicted RBP16.89■□□□□ 0.29
HERC3-214ENST00000601319 SCHIP1Q9P0W5 487 aaPredicted RBP16.89■□□□□ 0.29
HERC3-214ENST00000601319 ZNF624Q9P2J8 865 aaPredicted RBP16.89■□□□□ 0.29
HERC3-214ENST00000601319 CRLS1Q9UJA2 301 aa16.89■□□□□ 0.29
HERC3-214ENST00000601319 LHX6Q9UPM6 363 aa16.89■□□□□ 0.29
HERC3-214ENST00000601319 OR2AG2A6NM03 316 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 E7EVH7 732 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 CEP104O60308 925 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 POP7O75817 140 aaKnown RBP16.88■□□□□ 0.29
HERC3-214ENST00000601319 GAS8O95995 478 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 JMJD7P0C870 316 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 RALBP11234 206 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 TPH1P17752 444 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 MC4RP32245 332 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 HALP42357 657 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 LAMB3Q13751 1172 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 SEPT6Q14141 434 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 COL28A1Q2UY09 1125 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 FNBP1LQ5T0N5 605 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 NKAIN2Q5VXU1 208 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 TMEM71Q6P5X7 295 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 FOXR1Q6PIV2 292 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 TMEM220Q6QAJ8 160 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 TAB3Q8N5C8 712 aaPredicted RBP16.88■□□□□ 0.29
HERC3-214ENST00000601319 GLIS1Q8NBF1 620 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 OR52K1Q8NGK4 314 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 AHCYL2Q96HN2 611 aaKnown RBP16.88■□□□□ 0.29
HERC3-214ENST00000601319 LINC00615Q96LM1 132 aaPredicted RBP16.88■□□□□ 0.29
HERC3-214ENST00000601319 RANBP9Q96S59 729 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 COPS8Q99627 209 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 DPH1Q9BZG8 443 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 SLC30A1Q9Y6M5 507 aa16.88■□□□□ 0.29
HERC3-214ENST00000601319 MN1Q10571 1320 aaPredicted RBP16.88■□□□□ 0.29
HERC3-214ENST00000601319 MGAT4DA6NG13 374 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms