RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 LKAAEAR1Q8TD35 194 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 THOC1Q96FV9 657 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 ATOH8Q96SQ7 321 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 DRC3Q9H069 523 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 SCML1Q9UN30 329 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 PLXNA2O75051 1894 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 A0A1W2PP55 124 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 A8MT66 165 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 QSOX1O00391 747 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 RNASEH2AO75792 299 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 DNTTP04053 509 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 NFKB2Q00653 900 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 EOGTQ5NDL2 527 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 C6orf89Q6UWU4 347 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 NAT14Q8WUY8 206 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 MKRN2Q9H000 416 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 RNF112Q9ULX5 631 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 CKAP5Q14008 2032 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 TRIOBPQ9H2D6 2365 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 NEMP2A6NFY4 417 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 SHISA7A6NL88 538 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 SYCE1LA8MT33 242 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 CDC7O00311 574 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 BTN3A1O00481 513 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 MAN2B1O00754 1011 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 NPHS1O60500 1241 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 LYPLA1O75608 230 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 SNUPNO95149 360 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 HSPA4LO95757 839 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 CBSLP0DN79 551 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 C7P10643 843 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 COL9A1P20849 921 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 HNRNPH1P31943 449 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 CBSP35520 551 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 SERPINB5P36952 375 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 ZBTB16Q05516 673 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 RCN2Q14257 317 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 TRIM67Q6ZTA4 783 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 PIWIL4Q7Z3Z4 852 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 CACUL1Q86Y37 369 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 PHYKPLQ8IUZ5 450 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 DEFB123Q8N688 67 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 C10orf82Q8WW14 230 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 FAM131CQ96AQ9 280 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 SORT1Q99523 831 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 CD248Q9HCU0 757 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 FBXL12Q9NXK8 326 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 NCKIPSDQ9NZQ3 722 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 TMCO1Q9UM00 188 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 USH1CQ9Y6N9 552 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 PLXNB3Q9ULL4 1909 aa17.41■□□□□ 0.38
SHKBP1-224ENST00000600718 LOC730098B7Z3J9 87 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 KPNA5O15131 536 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 TM7SF2O76062 418 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 PCDH8O95206 1070 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 IMPDH1P20839 514 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 GPR1P46091 355 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 CCINQ13939 588 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 TSNQ15631 228 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 CFAP157Q5JU67 520 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 DET1Q7L5Y6 550 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 RFWD2Q8NHY2 731 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 PIWIL2Q8TC59 973 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 GANCQ8TET4 914 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 FUBP1Q96AE4 644 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 CNDP1Q96KN2 507 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 SERGEFQ9UGK8 458 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 IKZF3Q9UKT9 509 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 CNOT6Q9ULM6 557 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 DNAJC16Q9Y2G8 782 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 SZT2Q5T011 3432 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 NPEPPSL1A6NEC2 478 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 IGLON5A6NGN9 336 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 EIF3FO00303 357 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 MTX2O75431 263 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 SOD1P00441 154 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 ARRB2P32121 409 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 SFSWAPQ12872 951 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 TMEM115Q12893 351 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 AGERQ15109 404 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 KHDC1Q4VXA5 237 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 ACSBG2Q5FVE4 666 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 RAET1GQ6H3X3 334 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 RAB44Q7Z6P3 723 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 WDR75Q8IWA0 830 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 MYO1HQ8N1T3 1032 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 CCNYL1Q8N7R7 359 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 PHF21BQ96EK2 531 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 L3HYPDHQ96EM0 354 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 SIKE1Q9BRV8 207 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 CYP4F12Q9HCS2 524 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 DCTN4Q9UJW0 460 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 BRWD1Q9NSI6 2320 aa17.4■□□□□ 0.38
SHKBP1-224ENST00000600718 INPP4BO15327 924 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 FTH1P02794 183 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 MTHFD2P13995 350 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 AOAHP28039 575 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 CCR7P32248 378 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 ARFIP2P53365 341 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 IFT88Q13099 833 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms