RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 HGSO14964 777 aaPredicted RBP13.57□□□□□ -0.24
IRF3-225ENST00000600022 DUX1O43812 170 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 PGLSO95336 258 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 RBP3P10745 1247 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 THRAP10827 490 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 PTSQ03393 145 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 GALNT2Q10471 571 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 SLC10A2Q12908 348 aaPredicted RBP13.57□□□□□ -0.24
IRF3-225ENST00000600022 SNAP47Q5SQN1 464 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 C4orf22Q6V702 233 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 TIPARPQ7Z3E1 657 aaKnown RBP13.57□□□□□ -0.24
IRF3-225ENST00000600022 PCGF5Q86SE9 256 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 LZTR1Q8N653 840 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 IL22RA1Q8N6P7 574 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 BMPERQ8N8U9 685 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 OR4D9Q8NGE8 314 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 SLC37A2Q8TED4 501 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 AENQ8WTP8 325 aaKnown RBP13.57□□□□□ -0.24
IRF3-225ENST00000600022 CAVIN3Q969G5 261 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 SCRN2Q96FV2 425 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 SCARF2Q96GP6 870 aaPredicted RBP13.57□□□□□ -0.24
IRF3-225ENST00000600022 SPRY4Q9C004 299 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 PCDH9Q9HC56 1237 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 APMAPQ9HDC9 416 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 KCNK4Q9NYG8 393 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 PHTF1Q9UMS5 762 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 SNX24Q9Y343 169 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 NEU2Q9Y3R4 380 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 PCDHGA3Q9Y5H0 932 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 LRRK2Q5S007 2527 aa13.57□□□□□ -0.24
IRF3-225ENST00000600022 LOC101059948A0A1B0GTJ6 334 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 HACD1B0YJ81 288 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 PPP1R12AO14974 1030 aaPredicted RBP13.56□□□□□ -0.24
IRF3-225ENST00000600022 INPP4BO15327 924 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 PPFIA2O75334 1257 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 SEC31AO94979 1220 aaKnown RBP13.56□□□□□ -0.24
IRF3-225ENST00000600022 IFNB1P01574 187 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 IVLP07476 585 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 MX2P20592 715 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 CD82P27701 267 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 GPR3P46089 330 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 GPR1P46091 355 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 RENBPP51606 427 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 PLTPP55058 493 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 POLE2P56282 527 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 SQSTM1Q13501 440 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 ZNF235Q14590 738 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 PDK1Q15118 436 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 PRKD1Q15139 912 aaPredicted RBP13.56□□□□□ -0.24
IRF3-225ENST00000600022 PYCR3Q53H96 274 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 LRRC66Q68CR7 880 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 BORAQ6PGQ7 559 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 FAM129CQ86XR2 697 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 GSPT2Q8IYD1 628 aaKnown RBP13.56□□□□□ -0.24
IRF3-225ENST00000600022 CACNA2D3Q8IZS8 1091 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 AGBL5Q8NDL9 886 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 HDAC11Q96DB2 347 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 RTP4Q96DX8 246 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 ZNF599Q96NL3 588 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 MCCC1Q96RQ3 725 aaPredicted RBP13.56□□□□□ -0.24
IRF3-225ENST00000600022 RUFY1Q96T51 708 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 MGME1Q9BQP7 344 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 B3GNT4Q9C0J1 378 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 EPN3Q9H201 632 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 ZNF71Q9NQZ8 489 aaPredicted RBP13.56□□□□□ -0.24
IRF3-225ENST00000600022 AKAP7Q9P0M2 348 aaPredicted RBP13.56□□□□□ -0.24
IRF3-225ENST00000600022 ANAPC5Q9UJX4 755 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 PILRAQ9UKJ1 303 aa13.56□□□□□ -0.24
IRF3-225ENST00000600022 OAS3Q9Y6K5 1087 aaKnown RBP13.56□□□□□ -0.24
IRF3-225ENST00000600022 SMAPO00193 183 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 FZD6O60353 706 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 RAD1O60671 282 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 SOCS5O75159 536 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 MAP3K6O95382 1288 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 PRKAR1AP10644 381 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 CSTF2P33240 577 aaKnown RBP eCLIP13.55□□□□□ -0.24
IRF3-225ENST00000600022 RPL21P46778 160 aaKnown RBP13.55□□□□□ -0.24
IRF3-225ENST00000600022 DPTQ07507 201 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 PPIDQ08752 370 aaKnown RBP13.55□□□□□ -0.24
IRF3-225ENST00000600022 KCNAB2Q13303 367 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 BIRC2Q13490 618 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 CASP8Q14790 479 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 ATP1A1-AS1Q5TC04 95 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 TMEM71Q6P5X7 295 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 ZC3H18Q86VM9 953 aaKnown RBP13.55□□□□□ -0.24
IRF3-225ENST00000600022 NRSN1Q8IZ57 195 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 AP2M1Q96CW1 435 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 TMEM121Q9BTD3 319 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 RIOK2Q9BVS4 552 aaKnown RBP13.55□□□□□ -0.24
IRF3-225ENST00000600022 BRD8Q9H0E9 1235 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 VIPAS39Q9H9C1 493 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 NT5MQ9NPB1 228 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 PDP2Q9P2J9 529 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 CNOT6Q9ULM6 557 aaKnown RBP13.55□□□□□ -0.24
IRF3-225ENST00000600022 PPIL1Q9Y3C6 166 aa13.55□□□□□ -0.24
IRF3-225ENST00000600022 TEX15Q9BXT5 2789 aa13.54□□□□□ -0.24
IRF3-225ENST00000600022 MYBL2P10244 700 aa13.54□□□□□ -0.24
IRF3-225ENST00000600022 CYP2A6P11509 494 aaPredicted RBP13.54□□□□□ -0.24
IRF3-225ENST00000600022 SFTPCP11686 197 aa13.54□□□□□ -0.24
IRF3-225ENST00000600022 GARSP41250 739 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms