RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 ASB1Q9Y576 335 aa16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 SPTBN5Q9NRC6 3674 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 OTOL1A6NHN0 477 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 SLC25A14O95258 325 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 TRIM16O95361 564 aa16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 RPS17P08708 135 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 CCND1P24385 295 aa16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 CLCQ05315 142 aa16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 CUL3Q13618 768 aa16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 KHDC1Q4VXA5 237 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 SNX32Q86XE0 403 aa16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 SCUBE1Q8IWY4 988 aa16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 ACTRT2Q8TDY3 377 aa16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 PDLIM5Q96HC4 596 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 MSLNLQ96KJ4 702 aa16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 C3orf30Q96M34 536 aa16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 PLEKHG4BQ96PX9 1271 aa16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 KCNA7Q96RP8 456 aa16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 TTC1Q99614 292 aa16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 ZBTB26Q9HCK0 441 aa16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 SEMA4BQ9NPR2 832 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 UTP6Q9NYH9 597 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 DNAJC15Q9Y5T4 150 aa16.84■□□□□ 0.29
SHKBP1-216ENST00000598201 A0A088AWK7 358 aa16.83■□□□□ 0.28
SHKBP1-216ENST00000598201 PAPLNO95428 1278 aa16.83■□□□□ 0.28
SHKBP1-216ENST00000598201 ITGAXP20702 1163 aa16.83■□□□□ 0.28
SHKBP1-216ENST00000598201 PTPN5P54829 565 aa16.83■□□□□ 0.28
SHKBP1-216ENST00000598201 E2F5Q15329 346 aa16.83■□□□□ 0.28
SHKBP1-216ENST00000598201 LYPLAL1Q5VWZ2 237 aa16.83■□□□□ 0.28
SHKBP1-216ENST00000598201 CHSY3Q70JA7 882 aa16.83■□□□□ 0.28
SHKBP1-216ENST00000598201 CLYBLQ8N0X4 340 aa16.83■□□□□ 0.28
SHKBP1-216ENST00000598201 ARHGAP24Q8N264 748 aa16.83■□□□□ 0.28
SHKBP1-216ENST00000598201 HLA-CQ95604 372 aa16.83■□□□□ 0.28
SHKBP1-216ENST00000598201 EBF3Q9H4W6 596 aa16.83■□□□□ 0.28
SHKBP1-216ENST00000598201 UBE2ZQ9H832 354 aaPredicted RBP16.83■□□□□ 0.28
SHKBP1-216ENST00000598201 CD84Q9UIB8 345 aa16.83■□□□□ 0.28
SHKBP1-216ENST00000598201 TMPRSS11EQ9UL52 423 aa16.83■□□□□ 0.28
SHKBP1-216ENST00000598201 PTGDR2Q9Y5Y4 395 aa16.83■□□□□ 0.28
SHKBP1-216ENST00000598201 ANKRD12Q6UB98 2062 aa16.83■□□□□ 0.28
SHKBP1-216ENST00000598201 NUP210Q8TEM1 1887 aaPredicted RBP16.83■□□□□ 0.28
SHKBP1-216ENST00000598201 ATP6AP2A0A1C7CYW4 349 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 RGSL1A5PLK6 1076 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 STX16-NPEPL1H3BU86 382 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 STX16O14662 325 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 HOXC11O43248 304 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 TULP3O75386 442 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 ATP6AP2O75787 350 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 FGF4P08620 206 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 SPINT3P49223 89 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 B4GALNT1Q00973 533 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 TGFBIQ15582 683 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 ACSBG2Q5FVE4 666 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 ANKS6Q68DC2 871 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 MACC1Q6ZN28 852 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 ASB16Q96NS5 453 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 ASB2Q96Q27 587 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 C1QTNF3Q9BXJ4 246 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 S1PR5Q9H228 398 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 RNPEPL1Q9HAU8 725 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 CD274Q9NZQ7 290 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 SLC7A8Q9UHI5 535 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 C2orf16Q68DN1 1984 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 H3BQ06 376 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 PRDX3P30048 256 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 NNMTP40261 264 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 SLC6A11P48066 632 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 POLR2LP62875 67 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 LCP2Q13094 533 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 GAB4Q2WGN9 574 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 POM121L1PQ3SYA9 428 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 GPRC6AQ5T6X5 926 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 CES5AQ6NT32 575 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 BRAT1Q6PJG6 821 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 SBSNQ6UWP8 590 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 GPR149Q86SP6 731 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 ZNF483Q8TF39 744 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 FGF13Q92913 245 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 NXPE3Q969Y0 559 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 RTKNQ9BST9 563 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 MBD1Q9UIS9 605 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 PCTPQ9UKL6 214 aa16.82■□□□□ 0.28
SHKBP1-216ENST00000598201 A0A1W2PQ67 120 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 AZIN1O14977 448 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 SLC22A2O15244 555 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 ADH1CP00326 375 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 THRAP10827 490 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 TIMP2P16035 220 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 C18orf21Q32NC0 220 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 KANK2Q63ZY3 851 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 LARP4Q71RC2 724 aaKnown RBP eCLIP16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 HSD11B1LQ7Z5J1 315 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 ETFBKMTQ8IXQ9 262 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 HMGCLL1Q8TB92 370 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 BPIFB1Q8TDL5 484 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 C19orf60Q96EN9 201 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 TUBB1Q9H4B7 451 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 PCDH12Q9NPG4 1184 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 ZDHHC3Q9NYG2 299 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 IL36AQ9UHA7 158 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 EIF2B4Q9UI10 523 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms