RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 IL10RAQ13651 578 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 KCNAB1Q14722 419 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 PDK2Q15119 407 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 HADHQ16836 314 aaKnown RBP9.78□□□□□ -0.84
LIG1-209ENST00000596104 NADK2Q4G0N4 442 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 FAM182AQ5T1J6 154 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 PAPD7Q5XG87 772 aaKnown RBP9.78□□□□□ -0.84
LIG1-209ENST00000596104 IRGCQ6NXR0 463 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 CYB5D1Q6P9G0 228 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 SSC4DQ8WTU2 575 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 THAP4Q8WY91 577 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 SEC14L1Q92503 715 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 UBXN4Q92575 508 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 TADA1Q96BN2 335 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 CXorf40BQ96DE9 158 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 NAP1L5Q96NT1 182 aaPredicted RBP9.78□□□□□ -0.84
LIG1-209ENST00000596104 GPR87Q9BY21 358 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 PDE7BQ9NP56 450 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 RAD18Q9NS91 495 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 RARRES3Q9UL19 164 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 ZNF711Q9Y462 761 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 A0A087X0T9 212 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 A0A1B0GTH6 734 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 SLC4A1P02730 911 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 FAM228BP0C875 321 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 IDSP22304 550 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 FECHP22830 423 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 GJC1P36383 396 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 PGDP52209 483 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 TAS2R40P59535 323 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 ACY1Q03154 408 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 TYRO3Q06418 890 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 PPIDQ08752 370 aaKnown RBP9.77□□□□□ -0.85
LIG1-209ENST00000596104 CHAF1BQ13112 559 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 FIGNQ5HY92 759 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 FAM199XQ6PEV8 388 aaPredicted RBP9.77□□□□□ -0.85
LIG1-209ENST00000596104 CERS6Q6ZMG9 384 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 ZNF517Q6ZMY9 492 aaPredicted RBP9.77□□□□□ -0.85
LIG1-209ENST00000596104 SYVN1Q86TM6 617 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 BPHLQ86WA6 291 aaPredicted RBP9.77□□□□□ -0.85
LIG1-209ENST00000596104 SIDT2Q8NBJ9 832 aaKnown RBP9.77□□□□□ -0.85
LIG1-209ENST00000596104 KCTD6Q8NC69 237 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 CCNYQ8ND76 341 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 GPR150Q8NGU9 434 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 IMP4Q96G21 291 aaKnown RBP9.77□□□□□ -0.85
LIG1-209ENST00000596104 ZNF514Q96K75 400 aaPredicted RBP9.77□□□□□ -0.85
LIG1-209ENST00000596104 VPS35Q96QK1 796 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 MAP3K3Q99759 626 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 SLC25A23Q9BV35 468 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 FGF21Q9NSA1 209 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 CUEDC1Q9NWM3 386 aaPredicted RBP9.77□□□□□ -0.85
LIG1-209ENST00000596104 TRIM10Q9UDY6 481 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 SPO11Q9Y5K1 396 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 RP1L1Q8IWN7 2480 aaPredicted RBP9.77□□□□□ -0.85
LIG1-209ENST00000596104 NBPF19A0A087WUL8 3843 aa9.77□□□□□ -0.85
LIG1-209ENST00000596104 AURKAO14965 403 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 CEACAM4O75871 244 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 PROSCO94903 275 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 EBLN1P0CF75 366 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 CCL11P51671 97 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 CDK18Q07002 472 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 DMPKQ09013 629 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 GPS2Q13227 327 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 SLC14A2Q15849 920 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 RPE65Q16518 533 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 FILIP1LQ4L180 1135 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 ATP13A5Q4VNC0 1218 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 PRR30Q53SZ7 412 aaPredicted RBP9.76□□□□□ -0.85
LIG1-209ENST00000596104 KMT5CQ86Y97 462 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 TRAPPC5Q8IUR0 188 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 MAP7D3Q8IWC1 876 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 D2HGDHQ8N465 521 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 PLD5Q8N7P1 536 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 Q8NA96 180 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 ADAMTS17Q8TE56 1095 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 RAPGEF5Q92565 580 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 SYN2Q92777 582 aaPredicted RBP9.76□□□□□ -0.85
LIG1-209ENST00000596104 RNF157Q96PX1 679 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 CD180Q99467 661 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 BPIFA3Q9BQP9 254 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 CEP41Q9BYV8 373 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 GPR63Q9BZJ6 419 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 ING2Q9H160 280 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 SLC25A51Q9H1U9 297 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 NENFQ9UMX5 172 aa9.76□□□□□ -0.85
LIG1-209ENST00000596104 FARSAQ9Y285 508 aaKnown RBP9.76□□□□□ -0.85
LIG1-209ENST00000596104 BZW2Q9Y6E2 419 aaKnown RBP9.76□□□□□ -0.85
LIG1-209ENST00000596104 TLCD2A6NGC4 264 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 ARGFXA6NJG6 315 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 KCNJ13O60928 360 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 CPNE3O75131 537 aaKnown RBP9.75□□□□□ -0.85
LIG1-209ENST00000596104 NDST3O95803 873 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 VCLP18206 1134 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 LPOP22079 712 aaPredicted RBP9.75□□□□□ -0.85
LIG1-209ENST00000596104 KDELR1P24390 212 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 HALP42357 657 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 PTGIRP43119 386 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 CTSCP53634 463 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 RPS15P62841 145 aaKnown RBP9.75□□□□□ -0.85
LIG1-209ENST00000596104 TMEM115Q12893 351 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms