RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 XRCC1P18887 633 aaPredicted RBP13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 MIPP30301 263 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 CA5AP35218 305 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 RENBPP51606 427 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 GPS2Q13227 327 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 ZNF517Q6ZMY9 492 aaPredicted RBP13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 USP45Q70EL2 814 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 HPS6Q86YV9 775 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 VSTM4Q8IW00 320 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 TRIM48Q8IWZ4 208 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 ZBTB2Q8N680 514 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 GLIS1Q8NBF1 620 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 PIH1D2Q8WWB5 315 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 LURAP1Q96LR2 239 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 NUDCD1Q96RS6 583 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 WDR24Q96S15 920 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 BARD1Q99728 777 aaKnown RBP13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 UCK1Q9HA47 277 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 KLC4Q9NSK0 619 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 VPS18Q9P253 973 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 SLC23A2Q9UGH3 650 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 PCSK1NQ9UHG2 260 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 NENFQ9UMX5 172 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 G3BP2Q9UN86 482 aaKnown RBP13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 FBN3Q75N90 2809 aa13.5□□□□□ -0.25
SHKBP1-208ENST00000595726 MDC1Q14676 2089 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 PCSK5Q92824 1860 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 PCNX1Q96RV3 2341 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 FADS2P1A8MWK0 482 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 EEF2KO00418 725 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 DAPK3O43293 454 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 GRID2O43424 1007 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 PEX11BO96011 259 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 SNRPB2P08579 225 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 ERCC2P18074 760 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 HTR7P34969 479 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 PDE1BQ01064 536 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 ZNF235Q14590 738 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 SEPT7Q16181 437 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 ERMARDQ5T6L9 678 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 ARMC12Q5T9G4 340 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 PRAMEF17Q5VTA0 474 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 ALKBH5Q6P6C2 394 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 ZNF765Q7L2R6 523 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 NLRP8Q86W28 1048 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 PHYKPLQ8IUZ5 450 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 TTC30BQ8N4P2 665 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 ENDOVQ8N8Q3 282 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 UBE2Q2Q8WVN8 375 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 ZDHHC12Q96GR4 267 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 POM121Q96HA1 1249 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 KCTD15Q96SI1 283 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 DNAJC7Q99615 494 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 ILKAPQ9H0C8 392 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 DHX35Q9H5Z1 703 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 FGF21Q9NSA1 209 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 SNX7Q9UNH6 387 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 PPIL1Q9Y3C6 166 aa13.49□□□□□ -0.25
SHKBP1-208ENST00000595726 OR52A4PA6NMU1 304 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 EIF3CLB5ME19 914 aaKnown RBP13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 DDX3YO15523 660 aaKnown RBP13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 PRPSAP2O60256 369 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 CYP1A2P05177 515 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 ZNF8P17098 575 aaPredicted RBP13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 PCK1P35558 622 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 CAPZBP47756 277 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 VAV2P52735 878 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 STC1P52823 247 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 ATP1A4Q13733 1029 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 GPR18Q14330 331 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 PLA2G4EQ3MJ16 856 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 CCDC122Q5T0U0 273 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 IZUMO3Q5VZ72 239 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 MED25Q71SY5 747 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 CUZD1Q86UP6 607 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 KCNMB4Q86W47 210 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 PSTKQ8IV42 348 aaKnown RBP13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 SLC41A2Q96JW4 573 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 FCRL4Q96PJ5 515 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 EIF3CQ99613 913 aaKnown RBP13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 NUP85Q9BW27 656 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 ZBTB20Q9HC78 741 aaPredicted RBP13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 WASH6PQ9NQA3 447 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 ABHD10Q9NUJ1 306 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 ATXN10Q9UBB4 475 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 TRIM10Q9UDY6 481 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 TCFL5Q9UL49 500 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 DNAJC16Q9Y2G8 782 aa13.48□□□□□ -0.25
SHKBP1-208ENST00000595726 MASP2O00187 686 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 NUAK1O60285 661 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 MFAP3LO75121 409 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 SCRG1O75711 98 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 CLDN7O95471 211 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 BRAFP15056 766 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 TCF4P15884 667 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 RPL10P27635 214 aaKnown RBP13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 IL1R2P27930 398 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 PER3P56645 1201 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 IHHQ14623 411 aa13.47□□□□□ -0.25
SHKBP1-208ENST00000595726 LLGL1Q15334 1064 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms