RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 RHOT1Q8IXI2 618 aa14.5□□□□□ -0.09
PNKP-202ENST00000593706 GPR26Q8NDV2 337 aa14.5□□□□□ -0.09
PNKP-202ENST00000593706 CXorf40BQ96DE9 158 aa14.5□□□□□ -0.09
PNKP-202ENST00000593706 CEP41Q9BYV8 373 aa14.5□□□□□ -0.09
PNKP-202ENST00000593706 GPR63Q9BZJ6 419 aa14.5□□□□□ -0.09
PNKP-202ENST00000593706 ZNF768Q9H5H4 540 aaKnown RBP14.5□□□□□ -0.09
PNKP-202ENST00000593706 RAD18Q9NS91 495 aa14.5□□□□□ -0.09
PNKP-202ENST00000593706 POT1Q9NUX5 634 aa14.5□□□□□ -0.09
PNKP-202ENST00000593706 KCND3Q9UK17 655 aa14.5□□□□□ -0.09
PNKP-202ENST00000593706 POLHQ9Y253 713 aa14.5□□□□□ -0.09
PNKP-202ENST00000593706 PLAAQ9Y263 795 aa14.5□□□□□ -0.09
PNKP-202ENST00000593706 REXO2Q9Y3B8 237 aaKnown RBP14.5□□□□□ -0.09
PNKP-202ENST00000593706 ZNF711Q9Y462 761 aa14.5□□□□□ -0.09
PNKP-202ENST00000593706 PCDHA13Q9Y5I0 950 aa14.5□□□□□ -0.09
PNKP-202ENST00000593706 HEY1Q9Y5J3 304 aa14.5□□□□□ -0.09
PNKP-202ENST00000593706 ADGRG1Q9Y653 693 aa14.5□□□□□ -0.09
PNKP-202ENST00000593706 KCNMB2Q9Y691 235 aa14.5□□□□□ -0.09
PNKP-202ENST00000593706 SLC30A1Q9Y6M5 507 aa14.5□□□□□ -0.09
PNKP-202ENST00000593706 SOWAHDA6NJG2 315 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 CHUKO15111 745 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 PSTPIP1O43586 416 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 CCNYL3P0C7X3 344 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 ZNF7P17097 686 aaPredicted RBP14.49□□□□□ -0.09
PNKP-202ENST00000593706 VCLP18206 1134 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 RPL10P27635 214 aaKnown RBP14.49□□□□□ -0.09
PNKP-202ENST00000593706 LEPRP48357 1165 aaKnown RBP14.49□□□□□ -0.09
PNKP-202ENST00000593706 AP1B1Q10567 949 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 IL11RAQ14626 422 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 C11orf63Q6NUN7 778 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 IRGCQ6NXR0 463 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 MFSD7Q6UXD7 560 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 FAM92BQ6ZTR7 304 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 TRAPPC5Q8IUR0 188 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 TMEM139Q8IV31 216 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 TRAM1L1Q8N609 369 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 CNTD1Q8N815 330 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 TEX19Q8NA77 164 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.49□□□□□ -0.09
PNKP-202ENST00000593706 RSC1A1Q92681 617 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 TIMM29Q9BSF4 260 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 BRD8Q9H0E9 1235 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 ZNF624Q9P2J8 865 aaPredicted RBP14.49□□□□□ -0.09
PNKP-202ENST00000593706 SLC23A2Q9UGH3 650 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 PIKFYVEQ9Y2I7 2098 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 SHANK1Q9Y566 2161 aa14.49□□□□□ -0.09
PNKP-202ENST00000593706 ESPL1Q14674 2120 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 CDC14CA4D256 554 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 OR52A4PA6NMU1 304 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 MTX2O75431 263 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 RFPL1O75677 317 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 GP1BBP13224 206 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 IDSP22304 550 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 SLC19A1P41440 591 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 MARCKSL1P49006 195 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 DRG2P55039 364 aaKnown RBP14.48□□□□□ -0.09
PNKP-202ENST00000593706 GTF2H3Q13889 308 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 GPR18Q14330 331 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 CACHD1Q5VU97 1274 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 NPNTQ6UXI9 565 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 RAD9BQ6WBX8 426 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 PRSS42Q7Z5A4 293 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 NT5DC3Q86UY8 548 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 PPP1R3BQ86XI6 285 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 FAM26EQ8N5C1 309 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 GDAP1Q8TB36 358 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 EID2BQ96D98 161 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 ZDHHC12Q96GR4 267 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 AGAP3Q96P47 875 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 TWSG1Q9GZX9 223 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 MAGEE1Q9HCI5 957 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 DDX56Q9NY93 547 aaKnown RBP14.48□□□□□ -0.09
PNKP-202ENST00000593706 NFKBIL1Q9UBC1 381 aaPredicted RBP14.48□□□□□ -0.09
PNKP-202ENST00000593706 TRIM10Q9UDY6 481 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 MAN2B2Q9Y2E5 1009 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 ALG6Q9Y672 507 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 UNC79Q9P2D8 2635 aa14.48□□□□□ -0.09
PNKP-202ENST00000593706 APOL1O14791 398 aa14.47□□□□□ -0.09
PNKP-202ENST00000593706 MTSS1O43312 755 aa14.47□□□□□ -0.09
PNKP-202ENST00000593706 SPOPO43791 374 aa14.47□□□□□ -0.09
PNKP-202ENST00000593706 KIF1CO43896 1103 aaKnown RBP14.47□□□□□ -0.09
PNKP-202ENST00000593706 VEGFDO43915 354 aa14.47□□□□□ -0.09
PNKP-202ENST00000593706 CDK14O94921 469 aa14.47□□□□□ -0.09
PNKP-202ENST00000593706 MT-ND3P03897 115 aa14.47□□□□□ -0.09
PNKP-202ENST00000593706 HALP42357 657 aa14.47□□□□□ -0.09
PNKP-202ENST00000593706 ADCY2Q08462 1091 aa14.47□□□□□ -0.09
PNKP-202ENST00000593706 PRKD1Q15139 912 aaPredicted RBP14.47□□□□□ -0.09
PNKP-202ENST00000593706 CCDC70Q6NSX1 233 aa14.47□□□□□ -0.09
PNKP-202ENST00000593706 TCTN3Q6NUS6 607 aa14.47□□□□□ -0.09
PNKP-202ENST00000593706 ASB18Q6ZVZ8 466 aa14.47□□□□□ -0.09
PNKP-202ENST00000593706 RBM12BQ8IXT5 1001 aaKnown RBP14.47□□□□□ -0.09
PNKP-202ENST00000593706 KATNAL2Q8IYT4 538 aa14.47□□□□□ -0.09
PNKP-202ENST00000593706 MIB2Q96AX9 1013 aa14.47□□□□□ -0.09
PNKP-202ENST00000593706 RNF25Q96BH1 459 aaPredicted RBP14.47□□□□□ -0.09
PNKP-202ENST00000593706 TADA1Q96BN2 335 aa14.47□□□□□ -0.09
PNKP-202ENST00000593706 IMP4Q96G21 291 aaKnown RBP14.47□□□□□ -0.09
PNKP-202ENST00000593706 TTC25Q96NG3 672 aa14.47□□□□□ -0.09
PNKP-202ENST00000593706 TRIB3Q96RU7 358 aa14.47□□□□□ -0.09
PNKP-202ENST00000593706 SLC40A1Q9NP59 571 aa14.47□□□□□ -0.09
PNKP-202ENST00000593706 EPN1Q9Y6I3 576 aaPredicted RBP14.47□□□□□ -0.09
PNKP-202ENST00000593706 CCDC88CQ9P219 2028 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms