RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 SLC17A9Q9BYT1 436 aa6.37□□□□□ -1.39
VPS4B-205ENST00000591383 SEMA4AQ9H3S1 761 aa6.37□□□□□ -1.39
VPS4B-205ENST00000591383 WDR26Q9H7D7 661 aa6.37□□□□□ -1.39
VPS4B-205ENST00000591383 BPIFA1Q9NP55 256 aa6.37□□□□□ -1.39
VPS4B-205ENST00000591383 HACD3Q9P035 362 aa6.37□□□□□ -1.39
VPS4B-205ENST00000591383 NDOR1Q9UHB4 597 aa6.37□□□□□ -1.39
VPS4B-205ENST00000591383 FEZ2Q9UHY8 353 aaPredicted RBP6.37□□□□□ -1.39
VPS4B-205ENST00000591383 PILRBQ9UKJ0 227 aa6.37□□□□□ -1.39
VPS4B-205ENST00000591383 TPX2Q9ULW0 747 aaKnown RBP6.37□□□□□ -1.39
VPS4B-205ENST00000591383 PKP3Q9Y446 797 aa6.37□□□□□ -1.39
VPS4B-205ENST00000591383 TNPO3Q9Y5L0 923 aaKnown RBP6.37□□□□□ -1.39
VPS4B-205ENST00000591383 ACTL7BQ9Y614 415 aa6.37□□□□□ -1.39
VPS4B-205ENST00000591383 FAM186AA6NE01 2351 aa6.37□□□□□ -1.39
VPS4B-205ENST00000591383 DMXL1Q9Y485 3027 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 A0A1B0GVT2 93 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 LOC285095A0A1B0GVY8 99 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 BLACEA4D250 179 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 C2orf81A6NN90 581 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 EFCAB8A8MWE9 144 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 PRAMEF26H0Y7S4 382 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 K7ESM1 405 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 PSMD11O00231 422 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 CCL22O00626 93 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 DNALI1O14645 258 aaPredicted RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 INPP4BO15327 924 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 STX7O15400 261 aaKnown RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 GPR39O43194 453 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 ZNF500O60304 480 aaPredicted RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 CRTAMO95727 393 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 RETP07949 1114 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 THEGLP0DJG4 465 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 HOXB4P17483 251 aaPredicted RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 GM2AP17900 193 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 POU3F2P20265 443 aaPredicted RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 MGAT1P26572 445 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 CD38P28907 300 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 HOXD12P35452 270 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 SPAM1P38567 509 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 GPR1P46091 355 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 RPL21P46778 160 aaKnown RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 CSNK1EP49674 416 aaKnown RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 ZNF140P52738 457 aaPredicted RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 THOP1P52888 689 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 ATXN3P54252 364 aaPredicted RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 RNF4P78317 190 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 GABREP78334 506 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 SARNPP82979 210 aaKnown RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 GRIK2Q13002 908 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 CALCOCO2Q13137 446 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 TUBB2AQ13885 445 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 STAT4Q14765 748 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 SF3A2Q15428 464 aaKnown RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 SF1Q15637 639 aaKnown RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 WSCD2Q2TBF2 565 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 AASDHQ4L235 1098 aaPredicted RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 TEX35Q5T0J7 233 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 CERCAMQ5T4B2 595 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 POMZP3Q6PJE2 187 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 FAM151BQ6UXP7 276 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 KYAT3Q6YP21 454 aaKnown RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 ASCL5Q7RTU5 278 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 MAATS1Q7Z4T9 603 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 FGD2Q7Z6J4 655 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 HEATR4Q86WZ0 1026 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 KLHDC8BQ8IXV7 354 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 PPIL6Q8IXY8 311 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 TTC30BQ8N4P2 665 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 OTUD6BQ8N6M0 293 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 CEP112Q8N8E3 955 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 TP53I13Q8NBR0 393 aaPredicted RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 NOA1Q8NC60 698 aaKnown RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 PLA2G15Q8NCC3 412 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 C2CD4AQ8NCU7 369 aaPredicted RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 OR4K2Q8NGD2 314 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 OR13C4Q8NGS5 318 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 RUBCNQ92622 972 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 SCAMP4Q969E2 229 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 AP2M1Q96CW1 435 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 LOXL4Q96JB6 756 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 DNAJC1Q96KC8 554 aaKnown RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 LYSMD1Q96S90 227 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 EDEM2Q9BV94 578 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 TUBB2BQ9BVA1 445 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 RIOK2Q9BVS4 552 aaKnown RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 SPATA16Q9BXB7 569 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 NUSAP1Q9BXS6 441 aaKnown RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 RAB17Q9H0T7 212 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 TRABDQ9H4I3 376 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 EBF2Q9HAK2 575 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 MAGEE1Q9HCI5 957 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 XAB2Q9HCS7 855 aaKnown RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 CASS4Q9NQ75 786 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 MBNL1Q9NR56 388 aaKnown RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 TMEM74BQ9NUR3 256 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 SYBUQ9NX95 663 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 SAMD15Q9P1V8 674 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 CGGBP1Q9UFW8 167 aaPredicted RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 MOSPD1Q9UJG1 213 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 PCOLCE2Q9UKZ9 415 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 SNX24Q9Y343 169 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms