RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 STRA8Q7Z7C7 330 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 GALNT13Q8IUC8 556 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 HID1Q8IV36 788 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 CTAGE3PQ8IX95 158 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 MREGQ8N565 214 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 CLDN19Q8N6F1 224 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 PNPLA1Q8N8W4 532 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 LINC00615Q96LM1 132 aaPredicted RBP12□□□□□ -0.49
DNMT1-218ENST00000589294 BIRC8Q96P09 236 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 CPNE1Q99829 537 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 TSSK1BQ9BXA7 367 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 EPB41L4BQ9H329 900 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 CARS2Q9HA77 564 aaKnown RBP12□□□□□ -0.49
DNMT1-218ENST00000589294 MRPL40Q9NQ50 206 aaKnown RBP12□□□□□ -0.49
DNMT1-218ENST00000589294 SMYD2Q9NRG4 433 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 DNAJC28Q9NX36 388 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 TXNDC16Q9P2K2 825 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 NCDNQ9UBB6 729 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 FETUBQ9UGM5 382 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 KLF15Q9UIH9 416 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 MOSPD1Q9UJG1 213 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 GNPTGQ9UJJ9 305 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 CORO1CQ9ULV4 474 aaPredicted RBP12□□□□□ -0.49
DNMT1-218ENST00000589294 CRYL1Q9Y2S2 319 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 UBA6A0AVT1 1052 aaPredicted RBP11.99□□□□□ -0.49
DNMT1-218ENST00000589294 H3BM21 787 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 POP7O75817 140 aaKnown RBP11.99□□□□□ -0.49
DNMT1-218ENST00000589294 CER1O95813 267 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 FTH1P02794 183 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 CTSEP14091 401 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 PKMP14618 531 aaKnown RBP11.99□□□□□ -0.49
DNMT1-218ENST00000589294 FMO4P31512 558 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 HSD17B3P37058 310 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 GP5P40197 560 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 GNPDA1P46926 289 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 CD151P48509 253 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 PRLHRP49683 370 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 CTSCP53634 463 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 CSE1LP55060 971 aaKnown RBP11.99□□□□□ -0.49
DNMT1-218ENST00000589294 MPP1Q00013 466 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 SMAD1Q15797 465 aaKnown RBP11.99□□□□□ -0.49
DNMT1-218ENST00000589294 ZNF789Q5FWF6 425 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 PTRHD1Q6GMV3 140 aaKnown RBP11.99□□□□□ -0.49
DNMT1-218ENST00000589294 MARK2Q7KZI7 788 aaKnown RBP11.99□□□□□ -0.49
DNMT1-218ENST00000589294 DET1Q7L5Y6 550 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 RD3Q7Z3Z2 195 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 AMZ2Q86W34 360 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 TRAPPC5Q8IUR0 188 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 ZNF547Q8IVP9 402 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 PHACTR4Q8IZ21 702 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 FSTL5Q8N475 847 aaPredicted RBP11.99□□□□□ -0.49
DNMT1-218ENST00000589294 PPM1NQ8N819 430 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 GPBAR1Q8TDU6 330 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 UBLCP1Q8WVY7 318 aaPredicted RBP11.99□□□□□ -0.49
DNMT1-218ENST00000589294 PDXPQ96GD0 296 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 TIMM29Q9BSF4 260 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 CCM2Q9BSQ5 444 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 MCMBPQ9BTE3 642 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 CCDC68Q9H2F9 335 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 FBXO6Q9NRD1 293 aaPredicted RBP11.99□□□□□ -0.49
DNMT1-218ENST00000589294 SEMA4GQ9NTN9 838 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 KLHL42Q9P2K6 505 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 SPASTQ9UBP0 616 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 PNMA8BQ9ULN7 279 aaPredicted RBP11.99□□□□□ -0.49
DNMT1-218ENST00000589294 GPSM3Q9Y4H4 160 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 CSNK1G3Q9Y6M4 447 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 OTOGLQ3ZCN5 2332 aa11.99□□□□□ -0.49
DNMT1-218ENST00000589294 A0A1B0GTQ1 180 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 MGAT4DA6NG13 374 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 OR2AG2A6NM03 316 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 KPNA5O15131 536 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 ZNF883P0CG24 379 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 ENGP17813 658 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 VCLP18206 1134 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 CD9P21926 228 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 SPRP35270 261 aaPredicted RBP11.98□□□□□ -0.49
DNMT1-218ENST00000589294 SKIV2L2P42285 1042 aaKnown RBP11.98□□□□□ -0.49
DNMT1-218ENST00000589294 CLCNKAP51800 687 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 ATXN3P54252 364 aaPredicted RBP11.98□□□□□ -0.49
DNMT1-218ENST00000589294 EIF3BP55884 814 aaKnown RBP11.98□□□□□ -0.49
DNMT1-218ENST00000589294 ARHGAP8P85298 464 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 PLOD1Q02809 727 aaPredicted RBP11.98□□□□□ -0.49
DNMT1-218ENST00000589294 SPEM2Q0P670 501 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 ELOCQ15369 112 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 CCDC6Q16204 474 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 UAP1Q16222 522 aaPredicted RBP11.98□□□□□ -0.49
DNMT1-218ENST00000589294 ZNF542PQ5EBM4 170 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 PRAMEF14Q5SWL7 426 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 UBAP2Q5T6F2 1119 aaKnown RBP11.98□□□□□ -0.49
DNMT1-218ENST00000589294 KCTD16Q68DU8 428 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 ZNF549Q6P9A3 640 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 CNSTQ6PJW8 725 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 LVRNQ6Q4G3 990 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 CHST15Q7LFX5 561 aaPredicted RBP11.98□□□□□ -0.49
DNMT1-218ENST00000589294 C11orf96Q7Z7L8 435 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 ZC3HC1Q86WB0 502 aaKnown RBP11.98□□□□□ -0.49
DNMT1-218ENST00000589294 OR2L2Q8NH16 312 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 SLC44A1Q8WWI5 657 aa11.98□□□□□ -0.49
DNMT1-218ENST00000589294 CCDC97Q96F63 343 aaPredicted RBP11.98□□□□□ -0.49
DNMT1-218ENST00000589294 PANX3Q96QZ0 392 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms