RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 KIR2DS3K7RE56 304 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 RRP8O43159 456 aaKnown RBP15.24■□□□□ 0.03
GCDH-208ENST00000588905 SRP72O76094 671 aaKnown RBP15.24■□□□□ 0.03
GCDH-208ENST00000588905 PRAMEF1O95521 474 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 CPNE6O95741 557 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 APRTP07741 180 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 ZNF7P17097 686 aaPredicted RBP15.24■□□□□ 0.03
GCDH-208ENST00000588905 PSMA3P25788 255 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 CD1CP29017 333 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 COILP38432 576 aaPredicted RBP15.24■□□□□ 0.03
GCDH-208ENST00000588905 EIF2S3P41091 472 aaKnown RBP15.24■□□□□ 0.03
GCDH-208ENST00000588905 ZFP36L1Q07352 338 aaKnown RBP15.24■□□□□ 0.03
GCDH-208ENST00000588905 CDH17Q12864 832 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 EIF3IQ13347 325 aaKnown RBP15.24■□□□□ 0.03
GCDH-208ENST00000588905 GTF2H3Q13889 308 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 KIR2DS5Q14953 304 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 TRIP13Q15645 432 aaPredicted RBP15.24■□□□□ 0.03
GCDH-208ENST00000588905 INSCQ1MX18 579 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.24■□□□□ 0.03
GCDH-208ENST00000588905 GPRC6AQ5T6X5 926 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 CRTC3Q6UUV7 619 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 USP53Q70EK8 1073 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 PIM3Q86V86 326 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 RASGEF1AQ8N9B8 481 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 DNAAF3Q8N9W5 541 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 DDHD1Q8NEL9 900 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 PRR11Q96HE9 360 aaPredicted RBP15.24■□□□□ 0.03
GCDH-208ENST00000588905 SLC46A1Q96NT5 459 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 DCBLD2Q96PD2 775 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 TIMM29Q9BSF4 260 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 ZCCHC2Q9C0B9 1178 aaKnown RBP15.24■□□□□ 0.03
GCDH-208ENST00000588905 ASB8Q9H765 288 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 ASCL3Q9NQ33 180 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 THSD1Q9NS62 852 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 NLE1Q9NVX2 485 aaPredicted RBP15.24■□□□□ 0.03
GCDH-208ENST00000588905 SMOXQ9NWM0 555 aa15.24■□□□□ 0.03
GCDH-208ENST00000588905 IGHV1OR21-1A0A087WYE8 117 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 AGAP14A8MT82 685 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 PLD2O14939 933 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 F3P13726 295 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 HADHAP40939 763 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 MLLT3P42568 568 aaPredicted RBP15.23■□□□□ 0.03
GCDH-208ENST00000588905 NFATC2Q13469 925 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 SQSTM1Q13501 440 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 SEPT6Q14141 434 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 MAP9Q49MG5 647 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 CCDC38Q502W7 563 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 PAPD7Q5XG87 772 aaKnown RBP15.23■□□□□ 0.03
GCDH-208ENST00000588905 FOXR1Q6PIV2 292 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 PPP1R21Q6ZMI0 780 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 LRRC69Q6ZNQ3 347 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 RAB11FIP2Q7L804 512 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 TMPRSS9Q7Z410 1059 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 SLC9B2Q86UD5 537 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 TRAPPC5Q8IUR0 188 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 SLITRK4Q8IW52 837 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 FBXO39Q8N4B4 442 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 STYXQ8WUJ0 223 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 SH3KBP1Q96B97 665 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 CDKN2AIPNLQ96HQ2 116 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 SLC38A3Q99624 504 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 OSGEPL1Q9H4B0 414 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 FAM96AQ9H5X1 160 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 STN1Q9H668 368 aaKnown RBP15.23■□□□□ 0.03
GCDH-208ENST00000588905 RDH14Q9HBH5 336 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 SARS2Q9NP81 518 aaKnown RBP15.23■□□□□ 0.03
GCDH-208ENST00000588905 PRDM8Q9NQV8 689 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 EIF2B3Q9NR50 452 aaKnown RBP15.23■□□□□ 0.03
GCDH-208ENST00000588905 KCNK4Q9NYG8 393 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 NEU2Q9Y3R4 380 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 ATMQ13315 3056 aa15.23■□□□□ 0.03
GCDH-208ENST00000588905 TCRBV7S3A2A0A539 114 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 PMS2P1A4D2B8 440 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 H7C0S8 307 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 KCNJ13O60928 360 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 TNFSF15O95150 251 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 KRT14P02533 472 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 TCP1P17987 556 aaKnown RBP15.22■□□□□ 0.03
GCDH-208ENST00000588905 VCLP18206 1134 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 CDKN1CP49918 316 aaPredicted RBP15.22■□□□□ 0.03
GCDH-208ENST00000588905 ARSDP51689 593 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 CTSCP53634 463 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 PCBP4P57723 403 aaKnown RBP15.22■□□□□ 0.03
GCDH-208ENST00000588905 GPLD1P80108 840 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 BASP1P80723 227 aaKnown RBP15.22■□□□□ 0.03
GCDH-208ENST00000588905 HHEXQ03014 270 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 PLA2G4EQ3MJ16 856 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 C11orf96Q7Z7L8 435 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 AVL9Q8NBF6 648 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 TMEM159Q96B96 161 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 DPYSL5Q9BPU6 564 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 NUDT22Q9BRQ3 303 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 SEMA6CQ9H3T2 930 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 KCND1Q9NSA2 647 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 DNAJC16Q9Y2G8 782 aa15.22■□□□□ 0.03
GCDH-208ENST00000588905 DNMT3AQ9Y6K1 912 aaPredicted RBP15.22■□□□□ 0.03
GCDH-208ENST00000588905 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.21■□□□□ 0.03
GCDH-208ENST00000588905 CCDC78A2IDD5 438 aa15.21■□□□□ 0.03
GCDH-208ENST00000588905 PRR19A6NJB7 356 aa15.21■□□□□ 0.03
GCDH-208ENST00000588905 FANCGO15287 622 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms