RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 TEX101Q9BY14 249 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 UNKQ9C0B0 810 aaKnown RBP11.16□□□□□ -0.62
VMP1-207ENST00000588131 POPDC3Q9HBV1 291 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 SARS2Q9NP81 518 aaKnown RBP11.16□□□□□ -0.62
VMP1-207ENST00000588131 IGSF5Q9NSI5 407 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 TAS2R13Q9NYV9 303 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 TMEM216Q9P0N5 145 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 ATXN10Q9UBB4 475 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 TRMT6Q9UJA5 497 aaKnown RBP11.16□□□□□ -0.62
VMP1-207ENST00000588131 CA5BQ9Y2D0 317 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 ANKRD6Q9Y2G4 727 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 ACOT9Q9Y305 439 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 OR1A2Q9Y585 309 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 TMEM221A6NGB7 291 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 OR2AG2A6NM03 316 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 E5RI56 91 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 H3BMM5 538 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 M0R296 226 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 LATO43561 262 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 AP2A2O94973 939 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 FSBPO95073 299 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 KLHL2O95198 593 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 ZWINTO95229 277 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 TRIM16O95361 564 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 OR56A5P0C7T3 313 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 RALBP11234 206 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 ZNF37AP17032 561 aaPredicted RBP11.15□□□□□ -0.62
VMP1-207ENST00000588131 TRIM23P36406 574 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 CCT5P48643 541 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 SLC18A1P54219 525 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 WDR4P57081 412 aaKnown RBP11.15□□□□□ -0.62
VMP1-207ENST00000588131 CSHL1Q14406 222 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 N4BP2L1Q5TBK1 243 aaPredicted RBP11.15□□□□□ -0.62
VMP1-207ENST00000588131 DOK6Q6PKX4 331 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 LVRNQ6Q4G3 990 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 TSSK4Q6SA08 328 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 NAPRTQ6XQN6 538 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 CPNE9Q8IYJ1 553 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 DENND6BQ8NEG7 585 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 HEXDCQ8WVB3 486 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 BIRC7Q96CA5 298 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 UBXN10Q96LJ8 280 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 GPR78Q96P69 363 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 C1QTNF7Q9BXJ2 289 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 OR2AG1Q9H205 316 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 WDR26Q9H7D7 661 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 CNOT10Q9H9A5 744 aaKnown RBP11.15□□□□□ -0.62
VMP1-207ENST00000588131 TRIM39Q9HCM9 518 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 SPATA6Q9NWH7 488 aaPredicted RBP11.15□□□□□ -0.62
VMP1-207ENST00000588131 DCDC2Q9UHG0 476 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 RUVBL2Q9Y230 463 aaKnown RBP11.15□□□□□ -0.62
VMP1-207ENST00000588131 TMEM98Q9Y2Y6 226 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 PLLPQ9Y342 182 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 DHRS7Q9Y394 339 aa11.15□□□□□ -0.62
VMP1-207ENST00000588131 PCYT1BQ9Y5K3 369 aaPredicted RBP11.15□□□□□ -0.62
VMP1-207ENST00000588131 EML5Q05BV3 1969 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 PLXND1Q9Y4D7 1925 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 POM121BA6NF01 834 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 H0Y8X5 98 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 AXIN1O15169 862 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 TM9SF1O15321 606 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 LILRB5O75023 590 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 CDK14O94921 469 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 ASMTLO95671 621 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 PROCP04070 461 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 GSTA1P08263 222 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 CCDC166P0CW27 439 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 COL6A2P12110 1019 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 ZNF8P17098 575 aaPredicted RBP11.14□□□□□ -0.63
VMP1-207ENST00000588131 HNRNPA2B1P22626 353 aaKnown RBP11.14□□□□□ -0.63
VMP1-207ENST00000588131 CCR7P32248 378 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 ETV4P43268 484 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 GLRBP48167 497 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 PRLHRP49683 370 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 CCR5P51681 352 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 IRX4P78413 519 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 GUCY1A3Q02108 690 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 INSCQ1MX18 579 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 TTC19Q6DKK2 380 aaPredicted RBP11.14□□□□□ -0.63
VMP1-207ENST00000588131 LRRC8EQ6NSJ5 796 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 TMEM220Q6QAJ8 160 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 MAMSTRQ6ZN01 415 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 GCNT7Q6ZNI0 430 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 TBC1D1Q86TI0 1168 aaPredicted RBP11.14□□□□□ -0.63
VMP1-207ENST00000588131 ZBTB2Q8N680 514 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 DEFB119Q8N690 84 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 TMEM105Q8N8V8 129 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 ARMC2Q8NEN0 867 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 INPP5DQ92835 1189 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 FOXJ1Q92949 421 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 BMFQ96LC9 184 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 ORAI3Q9BRQ5 295 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 APOOQ9BUR5 198 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 IQCGQ9H095 443 aaKnown RBP11.14□□□□□ -0.63
VMP1-207ENST00000588131 SYTL2Q9HCH5 934 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 LATS2Q9NRM7 1088 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 NKIRAS1Q9NYS0 192 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 TSR3Q9UJK0 312 aaKnown RBP11.14□□□□□ -0.63
VMP1-207ENST00000588131 IKZF3Q9UKT9 509 aa11.14□□□□□ -0.63
VMP1-207ENST00000588131 GRID1Q9ULK0 1009 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms