RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, human

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF540-204	ENST00000586792		H3BML4	177 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792		M0QYV0	167 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	NDC80	O14777	642 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	FFAR2	O15552	330 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	PI15	O43692	258 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	PCDHGA12	O60330	932 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	ATG13	O75143	517 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	TPPP	O94811	219 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	KIAA0754	O94854	1291 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	POLB	P06746	335 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	PAEP	P09466	180 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	DRD1	P21728	446 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	CTSS	P25774	331 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	USP8	P40818	1118 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	RPS9	P46781	194 aa	Known RBP	4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	RAD23B	P54727	409 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	MFAP3	P55082	362 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	RAP2B	P61225	183 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	SLC7A9	P82251	487 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	BST2	Q10589	180 aa	Known RBP	4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	PON2	Q15165	354 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	ZNF77	Q15935	545 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	ASIC2	Q16515	512 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	STX1A	Q16623	288 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	EXOC3L4	Q17RC7	722 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	DPCR1	Q3MIW9	517 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	FAM209B	Q5JX69	171 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	C10orf120	Q5SQS8	335 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	CCDC183	Q5T5S1	534 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	ARHGAP17	Q68EM7	881 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	CLEC17A	Q6ZS10	378 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	RRAGA	Q7L523	313 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	TMEM150A	Q86TG1	271 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	PIGZ	Q86VD9	579 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	HEATR4	Q86WZ0	1026 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	TMTC1	Q8IUR5	882 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	EPHX4	Q8IUS5	362 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	ANKRD52	Q8NB46	1076 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	TOR1AIP2	Q8NFQ8	470 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	SCAMP5	Q8TAC9	235 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	RNF139	Q8WU17	664 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	SEMA4D	Q92854	862 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	CD101	Q93033	1021 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	OTUB2	Q96DC9	234 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	RSPRY1	Q96DX4	576 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	MOGAT1	Q96PD6	335 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	TWNK	Q96RR1	684 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	CYP2S1	Q96SQ9	504 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	SMO	Q99835	787 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	P2RY13	Q9BPV8	354 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	DDX23	Q9BUQ8	820 aa	Known RBP	4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	TRIM62	Q9BVG3	475 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	INTS2	Q9H0H0	1204 aa	Known RBP	4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	THAP9	Q9H5L6	903 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	LMAN1L	Q9HAT1	526 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	CSNK1G1	Q9HCP0	422 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	PLSCR4	Q9NRQ2	329 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	LMBRD1	Q9NUN5	540 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	HAUS2	Q9NVX0	235 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	ANO10	Q9NW15	660 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	PIH1D1	Q9NWS0	290 aa	Known RBP	4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	HPF1	Q9NWY4	346 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	FAM30A	Q9NZY2	134 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	CFAP97	Q9P2B7	532 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	VPS28	Q9UK41	221 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	FBXO4	Q9UKT5	387 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	RAB23	Q9ULC3	237 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	SCML2	Q9UQR0	700 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	PCDHGA8	Q9Y5G5	932 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	PCDHGA7	Q9Y5G6	932 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	PCDHGA6	Q9Y5G7	932 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	PCDHGA3	Q9Y5H0	932 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	PCDHGA2	Q9Y5H1	932 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	NOTCH4	Q99466	2003 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	MYH10	P35580	1976 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	DENND4C	Q5VZ89	1909 aa		4.78	□□□□□ -1.64
ZNF540-204	ENST00000586792	KIF26A	Q9ULI4	1882 aa	Predicted RBP	4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	TYW5	A2RUC4	315 aa	Known RBP	4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	PGPEP1L	A6NFU8	196 aa		4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	CAPN8	A6NHC0	703 aa		4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	KCNJ18	B7U540	433 aa		4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	CAPN9	O14815	690 aa		4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	XPO1	O14980	1071 aa	Known RBP	4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	KPNA5	O15131	536 aa		4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	COCH	O43405	550 aa		4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	THAP12	O43422	761 aa		4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	AKR1B10	O60218	316 aa		4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	BEST1	O76090	585 aa		4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	OAS1	P00973	400 aa	Known RBP	4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	CCDC172	P0C7W6	258 aa		4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	RARG	P13631	454 aa		4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	ATP1A3	P13637	1013 aa		4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	ARSA	P15289	507 aa		4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	RPS2	P15880	293 aa	Known RBP	4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	EEF1G	P26641	437 aa	Known RBP	4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	HNF4A	P41235	474 aa		4.77	□□□□□ -1.65
ZNF540-204	ENST00000586792	PIK3CB	P42338	1070 aa		4.77	□□□□□ -1.65

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