RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PDGFAP04085 211 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 FOLR1P15328 257 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 PMS2P54278 862 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 DRG2P55039 364 aaKnown RBP14.2□□□□□ -0.14
SDF2-202ENST00000585428 SEMA5AQ13591 1074 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 SLC14A2Q15849 920 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 SEPT7Q16181 437 aaKnown RBP14.2□□□□□ -0.14
SDF2-202ENST00000585428 PLA2G4EQ3MJ16 856 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 SLC9A4Q6AI14 798 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 FAM92BQ6ZTR7 304 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 BPHLQ86WA6 291 aaPredicted RBP14.2□□□□□ -0.14
SDF2-202ENST00000585428 DTX3LQ8TDB6 740 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 AGAP3Q96P47 875 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 SRPK1Q96SB4 655 aaKnown RBP14.2□□□□□ -0.14
SDF2-202ENST00000585428 GPR63Q9BZJ6 419 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 TWSG1Q9GZX9 223 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 BRD8Q9H0E9 1235 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 CTTNBP2NLQ9P2B4 639 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 LCMT1Q9UIC8 334 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 ZNF711Q9Y462 761 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 HEY1Q9Y5J3 304 aa14.2□□□□□ -0.14
SDF2-202ENST00000585428 SPENQ96T58 3664 aaKnown RBP14.19□□□□□ -0.14
SDF2-202ENST00000585428 IGHV5-51A0A0C4DH38 117 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 CDC14CA4D256 554 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 C21orf140B9A014 251 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 RFPL1O75677 317 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 H2AFZP0C0S5 128 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 FECHP22830 423 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 HMGCLP35914 325 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 FANCCQ00597 558 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 AP1B1Q10567 949 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 DNASE1L3Q13609 305 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 ATP13A5Q4VNC0 1218 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 PWWP2BQ6NUJ5 590 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 H2AFVQ71UI9 128 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 VSIG1Q86XK7 387 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 SPATA22Q8NHS9 363 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 BRSK1Q8TDC3 778 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 CT55Q8WUE5 264 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 CXorf40BQ96DE9 158 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 ZNF830Q96NB3 372 aaPredicted RBP14.19□□□□□ -0.14
SDF2-202ENST00000585428 OLFM3Q96PB7 478 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 GPR87Q9BY21 358 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 CEP41Q9BYV8 373 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 PDE7BQ9NP56 450 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 MLXIPLQ9NP71 852 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 IL26Q9NPH9 171 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 TRIM10Q9UDY6 481 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 LNPEPQ9UIQ6 1025 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 LUC7L2Q9Y383 392 aaKnown RBP14.19□□□□□ -0.14
SDF2-202ENST00000585428 SPO11Q9Y5K1 396 aa14.19□□□□□ -0.14
SDF2-202ENST00000585428 DOPEY2Q9Y3R5 2298 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 LOC285095A0A1B0GVY8 99 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 BLACEA4D250 179 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 NDST3O95803 873 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 MT-CYBP00156 380 aaPredicted RBP14.18□□□□□ -0.14
SDF2-202ENST00000585428 HNRNPH3P31942 346 aaKnown RBP14.18□□□□□ -0.14
SDF2-202ENST00000585428 PPP1CAP62136 330 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 DMPKQ09013 629 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 PDAP1Q13442 181 aaKnown RBP14.18□□□□□ -0.14
SDF2-202ENST00000585428 LAMB3Q13751 1172 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 PDK1Q15118 436 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 PCSK7Q16549 785 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 TEX44Q53QW1 395 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 IRGCQ6NXR0 463 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 CYB5D1Q6P9G0 228 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 FAM199XQ6PEV8 388 aaPredicted RBP14.18□□□□□ -0.14
SDF2-202ENST00000585428 ATCAYQ86WG3 371 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 UBXN4Q92575 508 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 IQCDQ96DY2 449 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 PACSIN1Q9BY11 444 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 TRIM55Q9BYV6 548 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 ACTL8Q9H568 366 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 GLOD4Q9HC38 313 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 BPIFA1Q9NP55 256 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 RARRES3Q9UL19 164 aa14.18□□□□□ -0.14
SDF2-202ENST00000585428 DNMT3AQ9Y6K1 912 aaPredicted RBP14.18□□□□□ -0.14
SDF2-202ENST00000585428 POP7O75817 140 aaKnown RBP14.17□□□□□ -0.14
SDF2-202ENST00000585428 DNAJB5O75953 348 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 GYPCP04921 128 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 VCLP18206 1134 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 PTPN4P29074 926 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 UBASH3AP57075 661 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 KCNAB1Q14722 419 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 RPE65Q16518 533 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 UGT8Q16880 541 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 ASTE1Q2TB18 679 aaPredicted RBP14.17□□□□□ -0.14
SDF2-202ENST00000585428 C4orf17Q53FE4 359 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 CCDC70Q6NSX1 233 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 NPNTQ6UXI9 565 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 ZNF517Q6ZMY9 492 aaPredicted RBP14.17□□□□□ -0.14
SDF2-202ENST00000585428 AMZ2Q86W34 360 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 KMT5CQ86Y97 462 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 RASGEF1AQ8N9B8 481 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 SIDT2Q8NBJ9 832 aaKnown RBP14.17□□□□□ -0.14
SDF2-202ENST00000585428 THAP4Q8WY91 577 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 SEC14L1Q92503 715 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 TEKT5Q96M29 485 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 RUFY1Q96T51 708 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 MAK16Q9BXY0 300 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms