RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 FAM46DQ8NEK8 389 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 FBXO25Q8TCJ0 367 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 SIGLEC10Q96LC7 697 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 LRRC61Q9BV99 259 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 CCDC68Q9H2F9 335 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 DPEP2Q9H4A9 486 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 TREX1Q9NSU2 369 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 TRNAU1APQ9NX07 287 aaKnown RBP13.69□□□□□ -0.22
TRAF4-215ENST00000584944 GRHL1Q9NZI5 618 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 NCKIPSDQ9NZQ3 722 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 RALYQ9UKM9 306 aaKnown RBP13.69□□□□□ -0.22
TRAF4-215ENST00000584944 CNOT6Q9ULM6 557 aaKnown RBP13.69□□□□□ -0.22
TRAF4-215ENST00000584944 PRKAB1Q9Y478 270 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 OAS3Q9Y6K5 1087 aaKnown RBP13.69□□□□□ -0.22
TRAF4-215ENST00000584944 CSNK1G3Q9Y6M4 447 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 LRRK1Q38SD2 2015 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 SPEGQ15772 3267 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 UBA6A0AVT1 1052 aaPredicted RBP13.68□□□□□ -0.22
TRAF4-215ENST00000584944 BANF1O75531 89 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 OR56A5P0C7T3 313 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 ATP1B2P14415 290 aaPredicted RBP13.68□□□□□ -0.22
TRAF4-215ENST00000584944 PBLDP30039 288 aaPredicted RBP13.68□□□□□ -0.22
TRAF4-215ENST00000584944 ACTR1BP42025 376 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 RPIAP49247 311 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 ACTR1AP61163 376 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 DAB2P98082 770 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 BNIP3Q12983 259 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 CRYMQ14894 314 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 DEFB133Q30KQ1 61 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 ZNF470Q6ECI4 717 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 PTRHD1Q6GMV3 140 aaKnown RBP13.68□□□□□ -0.22
TRAF4-215ENST00000584944 TMEM220Q6QAJ8 160 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 CAPN12Q6ZSI9 719 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 TMEM135Q86UB9 458 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 KCNMB4Q86W47 210 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 NAXDQ8IW45 347 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 LMNTD2Q8IXW0 634 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 EID2Q8N6I1 236 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 GSDMBQ8TAX9 411 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 SAP25Q8TEE9 199 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 FMO2Q99518 471 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 TMEM168Q9H0V1 697 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 NLGN3Q9NZ94 848 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 TXNDC16Q9P2K2 825 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 FAM8A1Q9UBU6 413 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 FTSJ1Q9UET6 329 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 GPR34Q9UPC5 381 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 MSRB2Q9Y3D2 182 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 NEUROG3Q9Y4Z2 214 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 DOCK9Q9BZ29 2069 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 DMXL2Q8TDJ6 3036 aa13.68□□□□□ -0.22
TRAF4-215ENST00000584944 KNL1Q8NG31 2342 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 KLHL33A6NCF5 533 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 GOLGA8KD6RF30 607 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 LMO7DNF2Z398 122 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 GOLGA8TH3BQL2 631 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 GAPDHSO14556 408 aaPredicted RBP13.67□□□□□ -0.22
TRAF4-215ENST00000584944 SNX2O60749 519 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 FTH1P02794 183 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 SLC2A4P14672 509 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 FOXN2P32314 431 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 PPM1FP49593 454 aaPredicted RBP13.67□□□□□ -0.22
TRAF4-215ENST00000584944 CDKN1CP49918 316 aaPredicted RBP13.67□□□□□ -0.22
TRAF4-215ENST00000584944 ITIH4Q14624 930 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 DBN1Q16643 649 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 MSS51Q4VC12 460 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 SYTL3Q4VX76 610 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 PYCR3Q53H96 274 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 LVRNQ6Q4G3 990 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 AMZ2Q86W34 360 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 RASGEF1AQ8N9B8 481 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 UBXN4Q92575 508 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 CDKL2Q92772 493 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 SGF29Q96ES7 293 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 SGSM3Q96HU1 749 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 PWWP2AQ96N64 755 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 TCF12Q99081 682 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 CDC6Q99741 560 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 TCEAL2Q9H3H9 227 aaPredicted RBP13.67□□□□□ -0.22
TRAF4-215ENST00000584944 KLC4Q9NSK0 619 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 UCKL1Q9NWZ5 548 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 ZFATQ9P243 1243 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 GULP1Q9UBP9 304 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 DMGDHQ9UI17 866 aaKnown RBP13.67□□□□□ -0.22
TRAF4-215ENST00000584944 KLF15Q9UIH9 416 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 KLK13Q9UKR3 277 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 DNAJC16Q9Y2G8 782 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 ZFYVE26Q68DK2 2539 aa13.67□□□□□ -0.22
TRAF4-215ENST00000584944 PKD1L2Q7Z442 2459 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 FAM221BA6H8Z2 402 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 PDZK1P1A8MUH7 402 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 B4DGG1 531 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 KCNJ13O60928 360 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 DNAJC6O75061 913 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 AP2A2O94973 939 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 TRIM16O95361 564 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 IDSP22304 550 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 PSMA3P25788 255 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 PHBP35232 272 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 HALP42357 657 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms