RNA–Protein interactions for RNA: ENST00000583569.5

NUP85-222, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-222	ENST00000583569	SYT17	Q9BSW7	474 aa		4.27	□□□□□ -1.73
NUP85-222	ENST00000583569	HGH1	Q9BTY7	390 aa		4.27	□□□□□ -1.73
NUP85-222	ENST00000583569	CENPO	Q9BU64	300 aa		4.27	□□□□□ -1.73
NUP85-222	ENST00000583569	DDX31	Q9H8H2	851 aa	Known RBP	4.27	□□□□□ -1.73
NUP85-222	ENST00000583569	LRRC4	Q9HBW1	653 aa		4.27	□□□□□ -1.73
NUP85-222	ENST00000583569	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.27	□□□□□ -1.73
NUP85-222	ENST00000583569	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
NUP85-222	ENST00000583569	PLSCR4	Q9NRQ2	329 aa		4.27	□□□□□ -1.73
NUP85-222	ENST00000583569	ANKEF1	Q9NU02	776 aa		4.27	□□□□□ -1.73
NUP85-222	ENST00000583569	TCP11L1	Q9NUJ3	509 aa		4.27	□□□□□ -1.73
NUP85-222	ENST00000583569	RCC2	Q9P258	522 aa	Known RBP	4.27	□□□□□ -1.73
NUP85-222	ENST00000583569	ZNF148	Q9UQR1	794 aa		4.27	□□□□□ -1.73
NUP85-222	ENST00000583569	PCDHAC2	Q9Y5I4	1007 aa		4.27	□□□□□ -1.73
NUP85-222	ENST00000583569	PRAG1	Q86YV5	1406 aa		4.27	□□□□□ -1.73
NUP85-222	ENST00000583569	PASK	Q96RG2	1323 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569		A0A1W2PP11	408 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	GLOD5	A6NK44	160 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569		A6NL46	340 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	NDUFS4	O43181	175 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	ZNHIT1	O43257	154 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	LDB3	O75112	727 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	FAM106CP	P0CH98	169 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	VPREB1	P12018	145 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	CDH1	P12830	882 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	HLA-DOB	P13765	273 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	TRIM21	P19474	475 aa	Known RBP	4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	NR2F2	P24468	414 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	MATR3	P43243	847 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	ARSE	P51690	589 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	CALD1	Q05682	793 aa	Known RBP	4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	FAM98B	Q52LJ0	330 aa	Known RBP	4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	OR7E24	Q6IFN5	339 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	SPSB3	Q6PJ21	355 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	TMCO3	Q6UWJ1	677 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	ASB18	Q6ZVZ8	466 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	TUBA1A	Q71U36	451 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	INTS8	Q75QN2	995 aa	Known RBP	4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	ZNF534	Q76KX8	674 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	GALNT5	Q7Z7M9	940 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	GALNT13	Q8IUC8	556 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	TMEM255B	Q8WV15	326 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	SECTM1	Q8WVN6	248 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	TTC14	Q96N46	770 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	TUBA1C	Q9BQE3	449 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	SLF1	Q9BQI6	1058 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	NEURL2	Q9BR09	285 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	APOL6	Q9BWW8	343 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	RETREG1	Q9H6L5	497 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	EBF2	Q9HAK2	575 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	AMACR	Q9UHK6	382 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	HACL1	Q9UJ83	578 aa		4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	RALY	Q9UKM9	306 aa	Known RBP	4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	PPIE	Q9UNP9	301 aa	Known RBP	4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	MAGED1	Q9Y5V3	778 aa	Predicted RBP	4.26	□□□□□ -1.73
NUP85-222	ENST00000583569	OR5K3	A6NET4	321 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	SMTNL1	A8MU46	457 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	TMEM178B	H3BS89	294 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	PLK4	O00444	970 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	SH2B2	O14492	632 aa	Predicted RBP	4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	ADAM20	O43506	726 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	WDR1	O75083	606 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	ZWINT	O95229	277 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	SNRNP70	P08621	437 aa	Known RBP	4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	NR2F1	P10589	423 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	TAF1	P21675	1872 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	KRT20	P35900	424 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	SNRPE	P62304	92 aa	Known RBP	4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	GRAP	Q13588	217 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	HAUS6	Q7Z4H7	955 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	MUC20	Q8N307	709 aa	Predicted RBP	4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	C1orf52	Q8N6N3	182 aa	Known RBP	4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	SYT2	Q8N9I0	419 aa	Predicted RBP	4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	AVL9	Q8NBF6	648 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	LNX1	Q8TBB1	728 aa	Predicted RBP	4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	TBC1D16	Q8TBP0	767 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	SORCS1	Q8WY21	1168 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	PHF21A	Q96BD5	680 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	GCNA	Q96QF7	691 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	ABHD1	Q96SE0	405 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	CDRT15	Q96T59	188 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	KLHL4	Q9C0H6	718 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	SPATC1L	Q9H0A9	340 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	SEMA6A	Q9H2E6	1030 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	SLCO5A1	Q9H2Y9	848 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	KCNK15	Q9H427	330 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	NKIRAS2	Q9NYR9	191 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	CLIC5	Q9NZA1	410 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	KLHL9	Q9P2J3	617 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	LARS	Q9P2J5	1176 aa	Known RBP	4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	MORF4L1	Q9UBU8	362 aa		4.25	□□□□□ -1.73
NUP85-222	ENST00000583569	ZCWPW2	A0A1B0GU75	182 aa		4.24	□□□□□ -1.73
NUP85-222	ENST00000583569	C15orf62	A8K5M9	175 aa		4.24	□□□□□ -1.73
NUP85-222	ENST00000583569	ANKRD66	B4E2M5	251 aa		4.24	□□□□□ -1.73
NUP85-222	ENST00000583569	PRAC2	D3DTV9	90 aa		4.24	□□□□□ -1.73
NUP85-222	ENST00000583569		H0YIN7	160 aa		4.24	□□□□□ -1.73
NUP85-222	ENST00000583569	TULP2	O00295	520 aa		4.24	□□□□□ -1.73
NUP85-222	ENST00000583569	EIF3D	O15371	548 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
NUP85-222	ENST00000583569	P4HA2	O15460	535 aa		4.24	□□□□□ -1.73
NUP85-222	ENST00000583569	BUD23	O43709	281 aa	Known RBP	4.24	□□□□□ -1.73
NUP85-222	ENST00000583569	BMP10	O95393	424 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms