RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 RIMKLBQ9ULI2 386 aa24.53■■□□□ 1.52
TSEN54-209ENST00000583454 D6RAR5 112 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 H7C0S8 307 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 CHUKO15111 745 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 SRP72O76094 671 aaKnown RBP24.52■■□□□ 1.52
TSEN54-209ENST00000583454 PRAMEF1O95521 474 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 CASQ1P31415 396 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 MLLT3P42568 568 aaPredicted RBP24.52■■□□□ 1.52
TSEN54-209ENST00000583454 VPS41P49754 854 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 CCL7P80098 99 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 C19orf57Q0VDD7 668 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 ILF3Q12906 894 aaKnown RBP eCLIP24.52■■□□□ 1.52
TSEN54-209ENST00000583454 LAMB3Q13751 1172 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 LRP8Q14114 963 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 SEPT6Q14141 434 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 ARHGAP40Q5TG30 622 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 BROXQ5VW32 411 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 OGFOD3Q6PK18 319 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 SYT10Q6XYQ8 523 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 ZNF843Q8N446 348 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 DDHD1Q8NEL9 900 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 GSDMCQ9BYG8 508 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 SYNDIG1Q9H7V2 258 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.52■■□□□ 1.52
TSEN54-209ENST00000583454 ZNHIT2Q9UHR6 403 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 PLEKHM1Q9Y4G2 1056 aa24.52■■□□□ 1.52
TSEN54-209ENST00000583454 TCRBV7S3A2A0A539 114 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 ERVH48-1M5A8F1 160 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 AP3B1O00203 1094 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 GPR39O43194 453 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 NOBOXO60393 691 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 TNFSF15O95150 251 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 ECEL1O95672 775 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 ADRA1DP25100 572 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 PAFAH1B1P43034 410 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 PTGIRP43119 386 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 TMPRSS15P98073 1019 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 NFATC2Q13469 925 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 SKIDA1Q1XH10 827 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 LDLRAP1Q5SW96 308 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 GPRC6AQ5T6X5 926 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 FAM46DQ8NEK8 389 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 CDKN2AIPNLQ96HQ2 116 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 ASB8Q9H765 288 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 PRKAB1Q9Y478 270 aa24.51■■□□□ 1.51
TSEN54-209ENST00000583454 HEATR9A2RTY3 570 aa24.5■■□□□ 1.51
TSEN54-209ENST00000583454 CCL22O00626 93 aa24.5■■□□□ 1.51
TSEN54-209ENST00000583454 GRID2O43424 1007 aa24.5■■□□□ 1.51
TSEN54-209ENST00000583454 MTX2O75431 263 aa24.5■■□□□ 1.51
TSEN54-209ENST00000583454 RPLP0P05388 317 aaKnown RBP24.5■■□□□ 1.51
TSEN54-209ENST00000583454 ITGA2BP08514 1039 aa24.5■■□□□ 1.51
TSEN54-209ENST00000583454 AK4P27144 223 aaPredicted RBP24.5■■□□□ 1.51
TSEN54-209ENST00000583454 TMEM115Q12893 351 aaPredicted RBP24.5■■□□□ 1.51
TSEN54-209ENST00000583454 CCDC38Q502W7 563 aa24.5■■□□□ 1.51
TSEN54-209ENST00000583454 LRRC8BQ6P9F7 803 aa24.5■■□□□ 1.51
TSEN54-209ENST00000583454 FOXR1Q6PIV2 292 aa24.5■■□□□ 1.51
TSEN54-209ENST00000583454 ZNF534Q76KX8 674 aa24.5■■□□□ 1.51
TSEN54-209ENST00000583454 CPT1BQ92523 772 aa24.5■■□□□ 1.51
TSEN54-209ENST00000583454 GFM1Q96RP9 751 aaKnown RBP24.5■■□□□ 1.51
TSEN54-209ENST00000583454 FOXP3Q9BZS1 431 aa24.5■■□□□ 1.51
TSEN54-209ENST00000583454 SPATS2LQ9NUQ6 558 aaKnown RBP24.5■■□□□ 1.51
TSEN54-209ENST00000583454 TAAR2Q9P1P5 351 aa24.5■■□□□ 1.51
TSEN54-209ENST00000583454 CCDC188H7C350 402 aa24.49■■□□□ 1.51
TSEN54-209ENST00000583454 CDK14O94921 469 aa24.49■■□□□ 1.51
TSEN54-209ENST00000583454 NPY2RP49146 381 aa24.49■■□□□ 1.51
TSEN54-209ENST00000583454 VAC14Q08AM6 782 aa24.49■■□□□ 1.51
TSEN54-209ENST00000583454 CLN3Q13286 438 aa24.49■■□□□ 1.51
TSEN54-209ENST00000583454 GPR33Q49SQ1 333 aa24.49■■□□□ 1.51
TSEN54-209ENST00000583454 ANKRD22Q5VYY1 191 aa24.49■■□□□ 1.51
TSEN54-209ENST00000583454 NLRP9Q7RTR0 991 aa24.49■■□□□ 1.51
TSEN54-209ENST00000583454 SNX20Q7Z614 316 aa24.49■■□□□ 1.51
TSEN54-209ENST00000583454 ARL14Q8N4G2 192 aa24.49■■□□□ 1.51
TSEN54-209ENST00000583454 GDAP1Q8TB36 358 aa24.49■■□□□ 1.51
TSEN54-209ENST00000583454 TTC9Q92623 222 aa24.49■■□□□ 1.51
TSEN54-209ENST00000583454 LRRN3Q9H3W5 708 aa24.49■■□□□ 1.51
TSEN54-209ENST00000583454 TCAF1Q9Y4C2 921 aa24.49■■□□□ 1.51
TSEN54-209ENST00000583454 CCKBRP32239 447 aa24.48■■□□□ 1.51
TSEN54-209ENST00000583454 MC4RP32245 332 aa24.48■■□□□ 1.51
TSEN54-209ENST00000583454 ARSDP51689 593 aa24.48■■□□□ 1.51
TSEN54-209ENST00000583454 RHDQ02161 417 aa24.48■■□□□ 1.51
TSEN54-209ENST00000583454 ACVR1Q04771 509 aa24.48■■□□□ 1.51
TSEN54-209ENST00000583454 PPP1R7Q15435 360 aa24.48■■□□□ 1.51
TSEN54-209ENST00000583454 PCID2Q5JVF3 399 aa24.48■■□□□ 1.51
TSEN54-209ENST00000583454 TSTD2Q5T7W7 516 aa24.48■■□□□ 1.51
TSEN54-209ENST00000583454 SLC30A9Q6PML9 568 aa24.48■■□□□ 1.51
TSEN54-209ENST00000583454 MCUQ8NE86 351 aa24.48■■□□□ 1.51
TSEN54-209ENST00000583454 OR6C4Q8NGE1 309 aa24.48■■□□□ 1.51
TSEN54-209ENST00000583454 OR13J1Q8NGT2 312 aa24.48■■□□□ 1.51
TSEN54-209ENST00000583454 PEX13Q92968 403 aa24.48■■□□□ 1.51
TSEN54-209ENST00000583454 RUNDC3BQ96NL0 473 aa24.48■■□□□ 1.51
TSEN54-209ENST00000583454 IL22Q9GZX6 179 aa24.48■■□□□ 1.51
TSEN54-209ENST00000583454 DPEP2Q9H4A9 486 aa24.48■■□□□ 1.51
TSEN54-209ENST00000583454 EPB41L5Q9HCM4 733 aa24.48■■□□□ 1.51
TSEN54-209ENST00000583454 BFARQ9NZS9 450 aa24.48■■□□□ 1.51
TSEN54-209ENST00000583454 TRBV5-4A0A0C4DH59 114 aa24.47■■□□□ 1.51
TSEN54-209ENST00000583454 K7ENP7 123 aa24.47■■□□□ 1.51
TSEN54-209ENST00000583454 PLD2O14939 933 aa24.47■■□□□ 1.51
TSEN54-209ENST00000583454 GLB1P16278 677 aa24.47■■□□□ 1.51
TSEN54-209ENST00000583454 ITGALP20701 1170 aa24.47■■□□□ 1.51
TSEN54-209ENST00000583454 SESN2P58004 480 aaPredicted RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms