RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 TOP1P11387 765 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 CETPP11597 493 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 ATP1A3P13637 1013 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 CAPN2P17655 700 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 SRD5A1P18405 259 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 MARK3P27448 753 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 CASQ1P31415 396 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 COPB2P35606 906 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 RXRGP48443 463 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 ATP12AP54707 1039 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 ARL4CP56559 192 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 FOXO1Q12778 655 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 SMC1AQ14683 1233 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 TAF5Q15542 800 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 AMZ1Q400G9 498 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 C1orf122Q6ZSJ8 110 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 EPHX4Q8IUS5 362 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 TC2NQ8N9U0 490 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 CCDC191Q8NCU4 936 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 MSANTD4Q8NCY6 345 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 MNS1Q8NEH6 495 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 CTCFLQ8NI51 663 aaPredicted RBP4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 LNX1Q8TBB1 728 aaPredicted RBP4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 RUBCNQ92622 972 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 LRRC59Q96AG4 307 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 FBXO17Q96EF6 278 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 PANX2Q96RD6 677 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 BAG1Q99933 345 aaPredicted RBP4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 PARD6BQ9BYG5 372 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 LRRC2Q9BYS8 371 aa4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 HOOK1Q9UJC3 728 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-208ENST00000583344 CPDO75976 1380 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 RGPD2P0DJD1 1756 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 SCN11AQ9UI33 1791 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 ZMYM6O95789 1325 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 STK36Q9NRP7 1315 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 DDX60Q8IY21 1712 aaKnown RBP4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 KLF18A0A0U1RQI7 1052 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 A0A1B0GUL7 405 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 TYW5A2RUC4 315 aaKnown RBP4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 C16orf97H3BN30 126 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 WNT9BO14905 357 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 NDUFS7O75251 213 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 BAIAP3O94812 1187 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 CD4P01730 458 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 RRM1P23921 792 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 ELF1P32519 619 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 ACTN2P35609 894 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 MPP1Q00013 466 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 ECT2LQ008S8 904 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 POSTNQ15063 836 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 PPP2R5BQ15173 497 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 ACCSLQ4AC99 568 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 ATP13A5Q4VNC0 1218 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 C14orf177Q52M58 125 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 ESCO2Q56NI9 601 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 CBWD5Q5RIA9 395 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 BEND6Q5SZJ8 279 aaPredicted RBP4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 PLA2G4FQ68DD2 849 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 SPECC1LQ69YQ0 1117 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 CPLX2Q6PUV4 134 aaKnown RBP4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 C4orf50Q6ZRC1 276 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 SLC26A9Q7LBE3 791 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 APTXQ7Z2E3 356 aaKnown RBP4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 PARP16Q8N5Y8 322 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 CEP112Q8N8E3 955 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 OR13A1Q8NGR1 328 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 GOLGA5Q8TBA6 731 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 CCDC51Q96ER9 411 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 ZNF334Q9HCZ1 680 aaPredicted RBP4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 CWC25Q9NXE8 425 aaPredicted RBP4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 CWC15Q9P013 229 aaKnown RBP4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 NID2Q14112 1375 aa4.02□□□□□ -1.77
SMCHD1-208ENST00000583344 NWD2Q9ULI1 1742 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 PXDNQ92626 1479 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 XIRP1Q702N8 1843 aaKnown RBP4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 A0A087WWV3 80 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 A0A0G2JLW4 131 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 ANTXRLA6NF34 631 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 CBY3A6NI87 242 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 HSPB2A8KAH6 182 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 AKR1B15C9JRZ8 316 aaPredicted RBP4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 K7ENM7 598 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 SH2B2O14492 632 aaPredicted RBP4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 SOCS6O14544 535 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 CPLX1O14810 134 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 ERLIN1O75477 346 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 AMBPP02760 352 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 FGF5P12034 268 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 MYL6BP14649 208 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 VEGFAP15692 232 aaPredicted RBP4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 IFNAR1P17181 557 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 XBP1P17861 261 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 CAPN3P20807 821 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 RYKP34925 604 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 TAF6P49848 677 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 GNG11P61952 73 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 TRDNQ13061 729 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 PRKG2Q13237 762 aa4.01□□□□□ -1.77
SMCHD1-208ENST00000583344 SLC39A6Q13433 755 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms