RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 TSTD2Q5T7W7 516 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 IYDQ6PHW0 289 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 ZNF438Q7Z4V0 828 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 C11orf96Q7Z7L8 435 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 SLC9B2Q86UD5 537 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 AMZ2Q86W34 360 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 SERPINA9Q86WD7 417 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 ZNF761Q86XN6 746 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 TRIM48Q8IWZ4 208 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 BEND7Q8N7W2 519 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 KDF1Q8NAX2 398 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 NAT14Q8WUY8 206 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 SGF29Q96ES7 293 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 ATXN7L3BQ96GX2 97 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 ZNF514Q96K75 400 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 CAPZA3Q96KX2 299 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 RANBP9Q96S59 729 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 SLC38A3Q99624 504 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 FOXP3Q9BZS1 431 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 NRSN2Q9GZP1 204 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 EPB41L5Q9HCM4 733 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 ZDHHC3Q9NYG2 299 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 KCNK4Q9NYG8 393 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 FAM8A1Q9UBU6 413 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 TCAF1Q9Y4C2 921 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 ENTPD2Q9Y5L3 495 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 BPTFQ12830 3046 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 CCDC162PA2VCL2 907 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 CTAGE9A4FU28 777 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 OR51F1A6NGY5 319 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 AGAP14A8MT82 685 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 AP3B1O00203 1094 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 MPOP05164 745 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 TPSB2P20231 275 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 FASLGP48023 281 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 FNTAP49354 379 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 PDX1P52945 283 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 DRG2P55039 364 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 INHBCP55103 352 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 GABREP78334 506 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 CDK16Q00536 496 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 NR1D2Q14995 579 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 RTP5Q14D33 572 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 TPSAB1Q15661 275 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 C3orf38Q5JPI3 329 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 FOXR1Q6PIV2 292 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 USP53Q70EK8 1073 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 B3GNT8Q7Z7M8 397 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 GRK7Q8WTQ7 553 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 HEXDCQ8WVB3 486 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 HDAC10Q969S8 669 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 SH3KBP1Q96B97 665 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 GRAMD1AQ96CP6 724 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 AHCYL2Q96HN2 611 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 TMEM74Q96NL1 305 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 RDH14Q9HBH5 336 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 SARS2Q9NP81 518 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 CPNE7Q9UBL6 633 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 SLC2A6Q9UGQ3 507 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 ZMIZ1Q9ULJ6 1067 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 DNMT3AQ9Y6K1 912 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 IGF2RP11717 2491 aa12.39□□□□□ -0.43
SMARCE1-218ENST00000582955 MAP1BP46821 2468 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 COL27A1Q8IZC6 1860 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 WDFY3Q8IZQ1 3526 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 TRBV5-4A0A0C4DH59 114 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 TCRBV7S3A2A0A539 114 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 KCNJ13O60928 360 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 CPNE6O95741 557 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 GOT2P00505 430 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 VIPP01282 170 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 ATP1B2P14415 290 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 ACRV1P26436 265 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 MGAT1P26572 445 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 HALP42357 657 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 MAPK9P45984 424 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 NPY2RP49146 381 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 PRAMEP78395 509 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 CRADDP78560 199 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 SARNPP82979 210 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 DMPKQ09013 629 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 NFE2L1Q14494 772 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 PPP1R7Q15435 360 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 BCL7AQ4VC05 210 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 PCID2Q5JVF3 399 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 PHF19Q5T6S3 580 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 NKAIN2Q5VXU1 208 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 PAPD7Q5XG87 772 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 AFTPHQ6ULP2 937 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 NLRP9Q7RTR0 991 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 PIM3Q86V86 326 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 PIANPQ8IYJ0 282 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 C17orf53Q8N3J3 647 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 AVL9Q8NBF6 648 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 OR13J1Q8NGT2 312 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 OR6P1Q8NGX9 317 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 OR10G6Q8NH81 332 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms