RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 OR6C1Q96RD1 312 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 MAK16Q9BXY0 300 aaKnown RBP10.42□□□□□ -0.74
RFFL-209ENST00000581265 CEP41Q9BYV8 373 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 SEMA5BQ9P283 1151 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 DNAJC16Q9Y2G8 782 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 KCTD3Q9Y597 815 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.42□□□□□ -0.74
RFFL-209ENST00000581265 CREBBPQ92793 2442 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 LOC285095A0A1B0GVY8 99 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 SSU72P8A0A1W2PR75 194 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 AURKAO14965 403 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 PPP1R12AO14974 1030 aaPredicted RBP10.41□□□□□ -0.74
RFFL-209ENST00000581265 KIF1CO43896 1103 aaKnown RBP10.41□□□□□ -0.74
RFFL-209ENST00000581265 MTX2O75431 263 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 MT-CYBP00156 380 aaPredicted RBP10.41□□□□□ -0.74
RFFL-209ENST00000581265 EPOP01588 193 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 VCLP18206 1134 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 NELFEP18615 380 aaKnown RBP10.41□□□□□ -0.74
RFFL-209ENST00000581265 RPL10P27635 214 aaKnown RBP10.41□□□□□ -0.74
RFFL-209ENST00000581265 HMGCLP35914 325 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 CAPZBP47756 277 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 GPR18Q14330 331 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 PCSK7Q16549 785 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.41□□□□□ -0.74
RFFL-209ENST00000581265 ATP13A5Q4VNC0 1218 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 LACTB2Q53H82 288 aaPredicted RBP10.41□□□□□ -0.74
RFFL-209ENST00000581265 FAM182AQ5T1J6 154 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 ATP1A1-AS1Q5TC04 95 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 FHL5Q5TD97 284 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 TCTN3Q6NUS6 607 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 GALNT6Q8NCL4 622 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 OR8K1Q8NGG5 319 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 SPATA22Q8NHS9 363 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 BRSK1Q8TDC3 778 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 RSC1A1Q92681 617 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 TEKT5Q96M29 485 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 FCRL4Q96PJ5 515 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 TRABDQ9H4I3 376 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 GLOD4Q9HC38 313 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 IL26Q9NPH9 171 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 IFNKQ9P0W0 207 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 KCND3Q9UK17 655 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 CROTQ9UKG9 612 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 PADI1Q9ULC6 663 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 PCDHGA6Q9Y5G7 932 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 SPO11Q9Y5K1 396 aa10.41□□□□□ -0.74
RFFL-209ENST00000581265 MRPS18BQ9Y676 258 aaKnown RBP10.41□□□□□ -0.74
RFFL-209ENST00000581265 USP9YO00507 2555 aaPredicted RBP10.41□□□□□ -0.74
RFFL-209ENST00000581265 A0A0A6YYK5 440 aaPredicted RBP10.4□□□□□ -0.74
RFFL-209ENST00000581265 SYCE3A1L190 88 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 OR52A4PA6NMU1 304 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 GOLGA6L19H0YKK7 550 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 PMPCBO75439 489 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 SPAG6O75602 509 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 RASSF9O75901 435 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 KIAA0754O94854 1291 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 NDUFA10O95299 355 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 SLC4A1P02730 911 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 MT-ND3P03897 115 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 CCNYL3P0C7X3 344 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 NR2C2P49116 596 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 DRG2P55039 364 aaKnown RBP10.4□□□□□ -0.74
RFFL-209ENST00000581265 DMPKQ09013 629 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 KLRB1Q12918 225 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 ERV3-1Q14264 604 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 SEPT7Q16181 437 aaKnown RBP10.4□□□□□ -0.74
RFFL-209ENST00000581265 PLA2G4EQ3MJ16 856 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 CACHD1Q5VU97 1274 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 ZDHHC20Q5W0Z9 365 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 CYB5D1Q6P9G0 228 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 NPNTQ6UXI9 565 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 BZW1Q7L1Q6 419 aaKnown RBP10.4□□□□□ -0.74
RFFL-209ENST00000581265 BPHLQ86WA6 291 aaPredicted RBP10.4□□□□□ -0.74
RFFL-209ENST00000581265 PPP1R3BQ86XI6 285 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 RASGRP3Q8IV61 690 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 CXorf40BQ96DE9 158 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 STAMBPL1Q96FJ0 436 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 SLC41A2Q96JW4 573 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 TTC25Q96NG3 672 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 DNAJC7Q99615 494 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 BPIFA1Q9NP55 256 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.4□□□□□ -0.74
RFFL-209ENST00000581265 POLHQ9Y253 713 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 WDR37Q9Y2I8 494 aa10.4□□□□□ -0.74
RFFL-209ENST00000581265 DNMT3AQ9Y6K1 912 aaPredicted RBP10.4□□□□□ -0.74
RFFL-209ENST00000581265 A1L4Q6 167 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 MKRN2OSH3BPM6 223 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 K7EM74 188 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 AKR1B10O60218 316 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 VPS4BO75351 444 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 CREG1O75629 220 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 POP7O75817 140 aaKnown RBP10.39□□□□□ -0.75
RFFL-209ENST00000581265 FURINP09958 794 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 FECHP22830 423 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 PTPN3P26045 913 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 ELAVL4P26378 380 aaKnown RBP10.39□□□□□ -0.75
RFFL-209ENST00000581265 CD68P34810 354 aaPredicted RBP10.39□□□□□ -0.75
RFFL-209ENST00000581265 HALP42357 657 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 SLC1A1P43005 524 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 WASHC5Q12768 1159 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms