RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 GP5P40197 560 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 PI4KAP42356 2102 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 POLD2P49005 469 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 CSNK1EP49674 416 aaKnown RBP10.26□□□□□ -0.77
CCDC47-203ENST00000580986 HK3P52790 923 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 PRSS12P56730 875 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 SRP54P61011 504 aaKnown RBP10.26□□□□□ -0.77
CCDC47-203ENST00000580986 HNRNPKP61978 463 aaKnown RBP eCLIP10.26□□□□□ -0.77
CCDC47-203ENST00000580986 PPARDQ03181 441 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 EIF2B5Q13144 721 aaKnown RBP10.26□□□□□ -0.77
CCDC47-203ENST00000580986 SLC29A2Q14542 456 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 NAA30Q147X3 362 aaPredicted RBP10.26□□□□□ -0.77
CCDC47-203ENST00000580986 ALG11Q2TAA5 492 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 KBTBD12Q3ZCT8 623 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 KHDC1Q4VXA5 237 aaKnown RBP10.26□□□□□ -0.77
CCDC47-203ENST00000580986 PYCR3Q53H96 274 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 TRIM61Q5EBN2 209 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 TPRG1LQ5T0D9 272 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 LRRTM4Q86VH4 590 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 SPATS2Q86XZ4 545 aaKnown RBP10.26□□□□□ -0.77
CCDC47-203ENST00000580986 DENND6AQ8IWF6 608 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 UNC5BQ8IZJ1 945 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 GDAP1Q8TB36 358 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 KCNJ9Q92806 393 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 PKNOX2Q96KN3 472 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 BIRC8Q96P09 236 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 PANX3Q96QZ0 392 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 TSSK1BQ9BXA7 367 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 NUSAP1Q9BXS6 441 aaKnown RBP10.26□□□□□ -0.77
CCDC47-203ENST00000580986 RHOJQ9H4E5 214 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 PPANQ9NQ55 473 aaKnown RBP10.26□□□□□ -0.77
CCDC47-203ENST00000580986 LATS2Q9NRM7 1088 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 IARS2Q9NSE4 1012 aaKnown RBP10.26□□□□□ -0.77
CCDC47-203ENST00000580986 IL1RAPL1Q9NZN1 696 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 TXNDC16Q9P2K2 825 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 GNPTGQ9UJJ9 305 aa10.26□□□□□ -0.77
CCDC47-203ENST00000580986 ATXN2Q99700 1313 aaKnown RBP10.26□□□□□ -0.77
CCDC47-203ENST00000580986 LAMA1P25391 3075 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 FRYLO94915 3013 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 A0A1B0GVT2 93 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 PRR19A6NJB7 356 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 H3BM21 787 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 KHNYNO15037 678 aaKnown RBP10.25□□□□□ -0.77
CCDC47-203ENST00000580986 KPNA5O15131 536 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 GRID2O43424 1007 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 ASMTLO95671 621 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 TNFP01375 233 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 AHSGP02765 367 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 FTH1P02794 183 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 PRSS56P0CW18 603 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 ZNF8P17098 575 aaPredicted RBP10.25□□□□□ -0.77
CCDC47-203ENST00000580986 HSD17B3P37058 310 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 CD151P48509 253 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 ARRB1P49407 418 aaPredicted RBP10.25□□□□□ -0.77
CCDC47-203ENST00000580986 BNC1Q01954 994 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 PLOD1Q02809 727 aaPredicted RBP10.25□□□□□ -0.77
CCDC47-203ENST00000580986 GRIK2Q13002 908 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 CTBP1Q13363 440 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 UAP1Q16222 522 aaPredicted RBP10.25□□□□□ -0.77
CCDC47-203ENST00000580986 GRTP1Q5TC63 336 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 ENPP7Q6UWV6 458 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 CCDC91Q7Z6B0 441 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 C11orf96Q7Z7L8 435 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 ZC3HC1Q86WB0 502 aaKnown RBP10.25□□□□□ -0.77
CCDC47-203ENST00000580986 TDRPQ86YL5 185 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 GALNT13Q8IUC8 556 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 ZNF547Q8IVP9 402 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 FSTL5Q8N475 847 aaPredicted RBP10.25□□□□□ -0.77
CCDC47-203ENST00000580986 OTUD6BQ8N6M0 293 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 RASGEF1AQ8N9B8 481 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 SLC44A1Q8WWI5 657 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 OR1E3Q8WZA6 343 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 PDXPQ96GD0 296 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 OR2M4Q96R27 311 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 ELF4Q99607 663 aaPredicted RBP10.25□□□□□ -0.77
CCDC47-203ENST00000580986 CCDC77Q9BR77 488 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 DHRS4Q9BTZ2 278 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 BOCQ9BWV1 1114 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 OR2AG1Q9H205 316 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 ARRDC1-AS1Q9H2J1 176 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 FAM96AQ9H5X1 160 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 SMYD2Q9NRG4 433 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 ARGLU1Q9NWB6 273 aaPredicted RBP10.25□□□□□ -0.77
CCDC47-203ENST00000580986 SLC24A2Q9UI40 661 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 SUFUQ9UMX1 484 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 CSNK1G3Q9Y6M4 447 aa10.25□□□□□ -0.77
CCDC47-203ENST00000580986 PIKFYVEQ9Y2I7 2098 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 GON4LQ3T8J9 2241 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 A0A1B0GTQ1 180 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 CXorf49A8MYA2 514 aaPredicted RBP10.24□□□□□ -0.77
CCDC47-203ENST00000580986 EIF3FO00303 357 aaPredicted RBP10.24□□□□□ -0.77
CCDC47-203ENST00000580986 PCDHGA12O60330 932 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 OR1I1O60431 355 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 MTX2O75431 263 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 HAUS5O94927 633 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 FUCA1P04066 466 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 CFIP05156 583 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 PKMP14618 531 aaKnown RBP10.24□□□□□ -0.77
CCDC47-203ENST00000580986 H2AFXP16104 143 aaPredicted RBP10.24□□□□□ -0.77
CCDC47-203ENST00000580986 VCLP18206 1134 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms