RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 UBOX5O94941 541 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 FSBPO95073 299 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 RBP1P09455 135 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 ALPIP09923 528 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 PRSS56P0CW18 603 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 CTPS1P17812 591 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 POLR2EP19388 210 aaKnown RBP17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 CSRP1P21291 193 aaKnown RBP17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 ITPKAP23677 461 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 IL12RB1P42701 662 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 ARFIP2P53365 341 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 SHC2P98077 582 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 CACNG1Q06432 222 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 RAD51Q06609 339 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 STARD3Q14849 445 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 AARS2Q5JTZ9 985 aaKnown RBP17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 LIPMQ5VYY2 423 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 FAM91A1Q658Y4 838 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 PSAPL1Q6NUJ1 521 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 ARMCX6Q7L4S7 300 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 RABEPKQ7Z6M1 372 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 KDM1BQ8NB78 822 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 HCAR2Q8TDS4 363 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 ANKRD49Q8WVL7 239 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 BIRC8Q96P09 236 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 GATA5Q9BWX5 397 aaPredicted RBP17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 NUSAP1Q9BXS6 441 aaKnown RBP17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 GPR63Q9BZJ6 419 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 ZFYVE1Q9HBF4 777 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 GPAMQ9HCL2 828 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 XPR1Q9UBH6 696 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 CRYL1Q9Y2S2 319 aa17.65■□□□□ 0.42
EIF4A1-216ENST00000580888 PFDN6O15212 129 aa17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 CDKN1CP49918 316 aaPredicted RBP17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 ACTN3Q08043 901 aaPredicted RBP17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 PTPRNQ16849 979 aa17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 DUOXA1Q1HG43 343 aa17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 NAPRTQ6XQN6 538 aa17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 CERS6Q6ZMG9 384 aa17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 PPP1R14CQ8TAE6 165 aa17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 PIWIL2Q8TC59 973 aaKnown RBP17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 SREK1Q8WXA9 508 aaKnown RBP17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 STON2Q8WXE9 905 aa17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 SKA1Q96BD8 255 aa17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 THOC1Q96FV9 657 aaKnown RBP17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 TMEM120AQ9BXJ8 343 aa17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 DRC3Q9H069 523 aa17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 MYLK2Q9H1R3 596 aa17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 P2RY12Q9H244 342 aa17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 STN1Q9H668 368 aaKnown RBP17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 CAPN10Q9HC96 672 aa17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 USP36Q9P275 1121 aaKnown RBP17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 SLC6A14Q9UN76 642 aa17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 CYP8B1Q9UNU6 501 aa17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 OAS3Q9Y6K5 1087 aaKnown RBP17.64■□□□□ 0.41
EIF4A1-216ENST00000580888 CCDC189A1A4V9 331 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 ZNF195O14628 629 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 NDUFS3O75489 264 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 SNUPNO95149 360 aaKnown RBP17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 CCDC166P0CW27 439 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 PKMP14618 531 aaKnown RBP17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 RPS3P23396 243 aaKnown RBP eCLIP17.63■□□□□ 0.412e-12■■■■■ 28
EIF4A1-216ENST00000580888 ATP5F1P24539 256 aaPredicted RBP17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 SKIV2L2P42285 1042 aaKnown RBP17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 SCTRP47872 440 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 ASPHQ12797 758 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 CSHL1Q14406 222 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 ZNF234Q14588 700 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 CRTC1Q6UUV9 634 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 ISCA2Q86U28 154 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 STK40Q8N2I9 435 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 LRIG1Q96JA1 1093 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 SCYL1Q96KG9 808 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 HEPHQ9BQS7 1158 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 SLC6A17Q9H1V8 727 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 BPIFA1Q9NP55 256 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 ITM2CQ9NQX7 267 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 CPSF2Q9P2I0 782 aaKnown RBP17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 DCTN4Q9UJW0 460 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 APPL1Q9UKG1 709 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 WASF2Q9Y6W5 498 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 NUMA1Q14980 2115 aa17.63■□□□□ 0.41
EIF4A1-216ENST00000580888 UPK3BL1B0FP48 263 aa17.62■□□□□ 0.41
EIF4A1-216ENST00000580888 UPK3BL2E5RIL1 263 aa17.62■□□□□ 0.41
EIF4A1-216ENST00000580888 ANKRD65E5RJM6 399 aa17.62■□□□□ 0.41
EIF4A1-216ENST00000580888 NPHS1O60500 1241 aa17.62■□□□□ 0.41
EIF4A1-216ENST00000580888 LYPLA1O75608 230 aaPredicted RBP17.62■□□□□ 0.41
EIF4A1-216ENST00000580888 DNAJC8O75937 253 aaPredicted RBP17.62■□□□□ 0.41
EIF4A1-216ENST00000580888 SRP72O76094 671 aaKnown RBP17.62■□□□□ 0.41
EIF4A1-216ENST00000580888 CLDN7O95471 211 aa17.62■□□□□ 0.41
EIF4A1-216ENST00000580888 IGLV3-19P01714 112 aa17.62■□□□□ 0.41
EIF4A1-216ENST00000580888 CEACAM1P13688 526 aa17.62■□□□□ 0.41
EIF4A1-216ENST00000580888 CD1DP15813 335 aa17.62■□□□□ 0.41
EIF4A1-216ENST00000580888 ZNF37AP17032 561 aaPredicted RBP17.62■□□□□ 0.41
EIF4A1-216ENST00000580888 BPIP17213 487 aa17.62■□□□□ 0.41
EIF4A1-216ENST00000580888 ENGP17813 658 aa17.62■□□□□ 0.41
EIF4A1-216ENST00000580888 SERPINB5P36952 375 aa17.62■□□□□ 0.41
EIF4A1-216ENST00000580888 GLRBP48167 497 aa17.62■□□□□ 0.41
EIF4A1-216ENST00000580888 CTSL3PQ5NE16 218 aa17.62■□□□□ 0.41
EIF4A1-216ENST00000580888 KLC3Q6P597 504 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms