RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 CCL22O00626 93 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 RASGRF2O14827 1237 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 KLF4O43474 513 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 LAMTOR5O43504 91 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 PAK4O96013 591 aaPredicted RBP7.93□□□□□ -1.14
COPS3-215ENST00000578317 B3GALT4O96024 378 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 INHBAP08476 426 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 HOXC4P09017 264 aaPredicted RBP7.93□□□□□ -1.14
COPS3-215ENST00000578317 NME2P22392 152 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 CNTFP26441 200 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 GABRB3P28472 473 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 GCAP28676 217 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 GP5P40197 560 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 PTGER3P43115 390 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 MSH2P43246 934 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 POLD2P49005 469 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 SERPINB9P50453 376 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 CSE1LP55060 971 aaKnown RBP7.93□□□□□ -1.14
COPS3-215ENST00000578317 ZNF844Q08AG5 666 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 IFFO1Q0D2I5 559 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 DNAJC3Q13217 504 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 FGL2Q14314 439 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 ITIH4Q14624 930 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 LRRC14Q15048 493 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 WSCD2Q2TBF2 565 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 ATP13A5Q4VNC0 1218 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 SEL1L3Q68CR1 1132 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 ZNF470Q6ECI4 717 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 PNCKQ6P2M8 343 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 FAM151BQ6UXP7 276 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 ADAMTSL4Q6UY14 1074 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 SLC36A4Q6YBV0 504 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 CTAGE3PQ8IX95 158 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 PIANPQ8IYJ0 282 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 MAML2Q8IZL2 1156 aaPredicted RBP7.93□□□□□ -1.14
COPS3-215ENST00000578317 PPM1NQ8N819 430 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 DTWD2Q8NBA8 298 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 UHMK1Q8TAS1 419 aaKnown RBP7.93□□□□□ -1.14
COPS3-215ENST00000578317 BTN2A2Q8WVV5 523 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 NELL1Q92832 810 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.93□□□□□ -1.14
COPS3-215ENST00000578317 NUS1Q96E22 293 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 RIOK2Q9BVS4 552 aaKnown RBP7.93□□□□□ -1.14
COPS3-215ENST00000578317 CD93Q9NPY3 652 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 IARS2Q9NSE4 1012 aaKnown RBP7.93□□□□□ -1.14
COPS3-215ENST00000578317 EURLQ9NYK6 297 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 MARCH4Q9P2E8 410 aaPredicted RBP7.93□□□□□ -1.14
COPS3-215ENST00000578317 CNOT6Q9ULM6 557 aaKnown RBP7.93□□□□□ -1.14
COPS3-215ENST00000578317 CORO1CQ9ULV4 474 aaPredicted RBP7.93□□□□□ -1.14
COPS3-215ENST00000578317 HS3ST3A1Q9Y663 406 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 IKBKGQ9Y6K9 419 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 CUL9Q8IWT3 2517 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 OR51F1A6NGY5 319 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 TOR1BO14657 336 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 UGT1A9O60656 530 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 KRT38O76015 456 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 SOD1P00441 154 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 SLC4A1P02730 911 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 IGHV4-34P06331 123 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 ARAFP10398 606 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 UGT1A6P19224 532 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 CD9P21926 228 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 UGT1A1P22309 533 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 UGT1A4P22310 534 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 PMLP29590 882 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 AVPR2P30518 371 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 SPRP35270 261 aaPredicted RBP7.92□□□□□ -1.14
COPS3-215ENST00000578317 UGT1A3P35503 534 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 UGT1A5P35504 534 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 SRSF11Q05519 484 aaKnown RBP7.92□□□□□ -1.14
COPS3-215ENST00000578317 CTBP1Q13363 440 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 MPP2Q14168 576 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 ZNF528Q3MIS6 628 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 SETMARQ53H47 684 aaPredicted RBP7.92□□□□□ -1.14
COPS3-215ENST00000578317 ZRANB3Q5FWF4 1079 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 TNFAIP8L3Q5GJ75 292 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 KIAA0895LQ68EN5 471 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 PSAPL1Q6NUJ1 521 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 TREML4Q6UXN2 200 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 PACS1Q6VY07 963 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 TIFABQ6ZNK6 161 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 STRA8Q7Z7C7 330 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 FAM124AQ86V42 546 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 C11orf74Q86VG3 221 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 WDR5BQ86VZ2 330 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 JAZF1Q86VZ6 243 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 SERPINA9Q86WD7 417 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 DENND6AQ8IWF6 608 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 NXPE1Q8N323 547 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 TMEM105Q8N8V8 129 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 TP53I13Q8NBR0 393 aaPredicted RBP7.92□□□□□ -1.14
COPS3-215ENST00000578317 OR2W6PQ8NHA6 318 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 DCAKDQ8WVC6 231 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 GLYATL1Q969I3 302 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 MTBPQ96DY7 904 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 PGM2Q96G03 612 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 PAFAH2Q99487 392 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 KLF6Q99612 283 aaPredicted RBP7.92□□□□□ -1.14
COPS3-215ENST00000578317 SH3GL2Q99962 352 aa7.92□□□□□ -1.14
COPS3-215ENST00000578317 SPATA16Q9BXB7 569 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms