RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 BCORL1Q5H9F3 1711 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 MLH3Q9UHC1 1453 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ERI2A8K979 691 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 STX16-NPEPL1H3BU86 382 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 PPEF2O14830 753 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 SUV39H1O43463 412 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 SLC19A2O60779 497 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 XYLBO75191 536 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ANXA5P08758 320 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 TRAPPC2P0DI81 140 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 TRAPPC2BP0DI82 140 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 CSH1P0DML2 217 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 CSH2P0DML3 217 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 MTHFD1P11586 935 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 LCP1P13796 627 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ILF3Q12906 894 aaKnown RBP eCLIP4.39□□□□□ -1.71
CDH8-205ENST00000577730 DDX39BQ13838 428 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 COL28A1Q2UY09 1125 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 NKAPLQ5M9Q1 402 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ULK3Q6PHR2 472 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 KLHL24Q6TFL4 600 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ADGRF4Q8IZF3 695 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 MOSPD2Q8NHP6 518 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ELMO3Q96BJ8 720 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 SERPINB11Q96P15 392 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 SLC29A1Q99808 456 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 TTLL2Q9BWV7 592 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 NIPAL2Q9H841 368 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 C3orf14Q9HBI5 128 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ANKEF1Q9NU02 776 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 COL20A1Q9P218 1284 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 GNG8Q9UK08 70 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 PRELID3BQ9Y3B1 194 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 MEIOCA2RUB1 952 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 PDCD5O14737 125 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 SNAPINO95295 136 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 CLIC3O95833 236 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 RPS17P08708 135 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 TGFB3P10600 412 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 NFKB1P19838 968 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 CFL1P23528 166 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 ECHS1P30084 290 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 HOXC8P31273 242 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 CCNA1P78396 465 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 TRIM28Q13263 835 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 DLGAP5Q15398 846 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 SEC23AQ15436 765 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 TSTQ16762 297 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 ASTE1Q2TB18 679 aaPredicted RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 TMEM119Q4V9L6 283 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 FAM209AQ5JX71 171 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 C6orf141Q5SZD1 244 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 OVOS1Q6IE37 1185 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 XRRA1Q6P2D8 792 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 IL27RAQ6UWB1 636 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 CES3Q6UWW8 571 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 MTSS1LQ765P7 747 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 CPNE9Q8IYJ1 553 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 BSNDQ8WZ55 320 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 SH2D3AQ9BRG2 576 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 LHPPQ9H008 270 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 XPNPEP1Q9NQW7 623 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 CORO2BQ9UQ03 480 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 MGAT4BQ9UQ53 548 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 GPSM3Q9Y4H4 160 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 NUMBLQ9Y6R0 609 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 CEMIPQ8WUJ3 1361 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 LAMC1P11047 1609 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 STX16O14662 325 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 PCDHGA12O60330 932 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 SLC22A5O76082 557 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 PRKCAP17252 672 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 TFEBP19484 476 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 CYP2F1P24903 491 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 SMIM11AP58511 58 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 UGT8Q16880 541 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 KRBOX4Q5JUW0 171 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ABI1Q8IZP0 508 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ESX1Q8N693 406 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 OR4C6Q8NH72 309 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 RXFP2Q8WXD0 754 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 PIGKQ92643 395 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 UFD1Q92890 307 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 MED15Q96RN5 788 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 OMDQ99983 421 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 QRSL1Q9H0R6 528 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 NUDT15Q9NV35 164 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 EIF2B4Q9UI10 523 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 FARP1Q9Y4F1 1045 aaPredicted RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 HRH3Q9Y5N1 445 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 OAS3Q9Y6K5 1087 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 NUP153P49790 1475 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 SLC37A4O43826 429 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 PMPCBO75439 489 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 FAM155BO75949 473 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 SBK2P0C263 348 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 RAB4AP20338 218 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 MAN2A2P49641 1150 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 RPS3AP61247 264 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 CYP24A1Q07973 514 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms