RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 CCL22O00626 93 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 FPGTO14772 594 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 PFDN6O15212 129 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 VEGFDO43915 354 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 FAM155BO75949 473 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 KRT38O76015 456 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 BCKDHBP21953 392 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 RPS3P23396 243 aaKnown RBP eCLIP11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 GABRB3P28472 473 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 GCAP28676 217 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 AKT2P31751 481 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CA5AP35218 305 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 IGFALSP35858 605 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 GPR1P46091 355 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 POLD2P49005 469 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CDKN1CP49918 316 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CSE1LP55060 971 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 RACK1P63244 317 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 RPL6Q02878 288 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SEMA3AQ14563 771 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 INPP5AQ14642 412 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 IRF4Q15306 451 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 GRTP1Q5TC63 336 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ALS2CLQ60I27 953 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 KYAT3Q6YP21 454 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 LPCAT2Q7L5N7 544 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SERPINA9Q86WD7 417 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 MFSD2AQ8NA29 543 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 HIC2Q96JB3 615 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CPNE1Q99829 537 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 APOOQ9BUR5 198 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 P2RY12Q9H244 342 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 LATS2Q9NRM7 1088 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 IARS2Q9NSE4 1012 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 EURLQ9NYK6 297 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ZFATQ9P243 1243 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 MARCH4Q9P2E8 410 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CD84Q9UIB8 345 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 GPR34Q9UPC5 381 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 COMMD10Q9Y6G5 202 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 TNRC6BQ9UPQ9 1833 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CCDC78A2IDD5 438 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 POM121BA6NF01 834 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 DYNC1I1O14576 645 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 MAP2K7O14733 419 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 TNFRSF10CO14798 259 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CHUKO15111 745 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SLC31A1O15431 190 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ATP8B1O43520 1251 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 AP2A2O94973 939 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 FSBPO95073 299 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CD59P13987 128 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CNTFP26441 200 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 MAT2AP31153 395 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 HOXD12P35452 270 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 GP5P40197 560 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 DPP6P42658 865 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 NSG1P42857 185 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SLC1A2P43004 574 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 RABIFP47224 123 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 KIAA1024LP59773 190 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CDK3Q00526 305 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 B4GALNT1Q00973 533 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 TMEM115Q12893 351 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 DNAJC3Q13217 504 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CTBP1Q13363 440 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 TRIP6Q15654 476 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 DBN1Q16643 649 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ZRANB3Q5FWF4 1079 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 WDR45BQ5MNZ6 344 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 GPRC6AQ5T6X5 926 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 LRIG3Q6UXM1 1119 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 MACC1Q6ZN28 852 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 GCNT7Q6ZNI0 430 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 TMPRSS7Q7RTY8 843 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CROCCP2Q86T23 111 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 DENND6AQ8IWF6 608 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 RBFAQ8N0V3 343 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 UBLCP1Q8WVY7 318 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 LPGAT1Q92604 370 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 FUBP1Q96AE4 644 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 LINC00615Q96LM1 132 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 BIRC8Q96P09 236 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 COPS8Q99627 209 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 RMI1Q9H9A7 625 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 IL1RAPL1Q9NZN1 696 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 KLHL42Q9P2K6 505 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SLC17A4Q9Y2C5 497 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 DNMT3AQ9Y6K1 912 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 MGAQ8IWI9 3026 aa11□□□□□ -0.65
CDK5RAP3-204ENST00000577664 DOPEY1Q5JWR5 2465 aa10.99□□□□□ -0.65
CDK5RAP3-204ENST00000577664 UBR5O95071 2799 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-204ENST00000577664 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.99□□□□□ -0.65
CDK5RAP3-204ENST00000577664 KLHL33A6NCF5 533 aa10.99□□□□□ -0.65
CDK5RAP3-204ENST00000577664 GOLGA8KD6RF30 607 aa10.99□□□□□ -0.65
CDK5RAP3-204ENST00000577664 GOLGA8TH3BQL2 631 aa10.99□□□□□ -0.65
CDK5RAP3-204ENST00000577664 QSOX1O00391 747 aa10.99□□□□□ -0.65
CDK5RAP3-204ENST00000577664 PRMT5O14744 637 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SGTAO43765 313 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms