RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 SGF29Q96ES7 293 aa14.98□□□□□ -0.01
LITAF-217ENST00000575426 SNF8Q96H20 258 aa14.98□□□□□ -0.01
LITAF-217ENST00000575426 TRIM31Q9BZY9 425 aa14.98□□□□□ -0.01
LITAF-217ENST00000575426 STN1Q9H668 368 aaKnown RBP14.98□□□□□ -0.01
LITAF-217ENST00000575426 ST14Q9Y5Y6 855 aa14.98□□□□□ -0.01
LITAF-217ENST00000575426 MAD1L1Q9Y6D9 718 aa14.98□□□□□ -0.01
LITAF-217ENST00000575426 U3KQA8 63 aa14.98□□□□□ -0.01
LITAF-217ENST00000575426 TRBV23OR9-2A0A075B6M9 112 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 KLHL33A6NCF5 533 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 PFDN6O15212 129 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 DKK1O94907 266 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 FOXN2P32314 431 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 CTSCP53634 463 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 ITIH4Q14624 930 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 MORF4L2Q15014 288 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 DNAJC21Q5F1R6 531 aaKnown RBP14.97□□□□□ -0.01
LITAF-217ENST00000575426 RAB44Q7Z6P3 723 aaPredicted RBP14.97□□□□□ -0.01
LITAF-217ENST00000575426 ZNF547Q8IVP9 402 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 PIANPQ8IYJ0 282 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 NAGSQ8N159 534 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 ARL14Q8N4G2 192 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 OTUD6BQ8N6M0 293 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 MFSD3Q96ES6 412 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 SGSM3Q96HU1 749 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 VPS37BQ9H9H4 285 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 TREX1Q9NSU2 369 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 CATSPERZQ9NTU4 200 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 LRIT1Q9P2V4 623 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 TBC1D29Q9UFV1 150 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 SLC23A2Q9UGH3 650 aa14.97□□□□□ -0.01
LITAF-217ENST00000575426 UTP11Q9Y3A2 253 aaKnown RBP14.97□□□□□ -0.01
LITAF-217ENST00000575426 IGLV3-16A0A075B6K0 115 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 FAM237BA0A1B0GVD1 139 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 MGAT4DA6NG13 374 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 PDZK1P1A8MUH7 402 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 QSOX1O00391 747 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 CD3EAPO15446 510 aaKnown RBP14.96□□□□□ -0.01
LITAF-217ENST00000575426 NUDT21O43809 227 aaKnown RBP14.96□□□□□ -0.01
LITAF-217ENST00000575426 HYAL3O43820 417 aaPredicted RBP14.96□□□□□ -0.01
LITAF-217ENST00000575426 VAPBO95292 243 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 PRSS56P0CW18 603 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 F3P13726 295 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 PNLIPP16233 465 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 IVDP26440 423 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 PMLP29590 882 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 HALP42357 657 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 NSG1P42857 185 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 ITGA8P53708 1063 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 MAZP56270 477 aaKnown RBP14.96□□□□□ -0.01
LITAF-217ENST00000575426 CALCOCO2Q13137 446 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 HLTFQ14527 1009 aaKnown RBP eCLIP14.96□□□□□ -0.01
LITAF-217ENST00000575426 DBN1Q16643 649 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 BCL7AQ4VC05 210 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 PERM1Q5SV97 790 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 ZNF449Q6P9G9 518 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 CES3Q6UWW8 571 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 ZNF572Q7Z3I7 529 aaPredicted RBP14.96□□□□□ -0.01
LITAF-217ENST00000575426 SDCCAG8Q86SQ7 713 aaPredicted RBP14.96□□□□□ -0.01
LITAF-217ENST00000575426 SLC9B2Q86UD5 537 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 TMPRSS12Q86WS5 348 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 PDIK1LQ8N165 341 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 MPP5Q8N3R9 675 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 AVL9Q8NBF6 648 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 MNS1Q8NEH6 495 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 WDR48Q8TAF3 677 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 CCDC74AQ96AQ1 378 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 ZNF669Q96BR6 464 aaPredicted RBP14.96□□□□□ -0.01
LITAF-217ENST00000575426 CCDC3Q9BQI4 270 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 RAB17Q9H0T7 212 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 SYNDIG1Q9H7V2 258 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 PRDM8Q9NQV8 689 aa14.96□□□□□ -0.01
LITAF-217ENST00000575426 CACNA1AO00555 2505 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 KIR2DS5A0A0G2JLQ3 304 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 A0A0G2JNG1 304 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 KIR2DS3K7RE56 304 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 RAD51CO43502 376 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 OPA1O60313 960 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 AP2A2O94973 939 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 POLBP06746 335 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 OR56A5P0C7T3 313 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 JUPP14923 745 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 PPM1FP49593 454 aaPredicted RBP14.95□□□□□ -0.02
LITAF-217ENST00000575426 TTPAP49638 278 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 PRLHRP49683 370 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 ARL4CP56559 192 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 B4GALNT1Q00973 533 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 KIR2DS5Q14953 304 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 SEPT7Q16181 437 aaKnown RBP14.95□□□□□ -0.02
LITAF-217ENST00000575426 BBS9Q3SYG4 887 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 ANKRD20A4Q4UJ75 823 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 KIAA0930Q6ICG6 404 aaPredicted RBP14.95□□□□□ -0.02
LITAF-217ENST00000575426 MRNIPQ6NTE8 343 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 HIBCHQ6NVY1 386 aaPredicted RBP14.95□□□□□ -0.02
LITAF-217ENST00000575426 IYDQ6PHW0 289 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 PACS1Q6VY07 963 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 C11orf96Q7Z7L8 435 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 C17orf82Q86X59 251 aaPredicted RBP14.95□□□□□ -0.02
LITAF-217ENST00000575426 SFTPA2Q8IWL1 248 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 TRIM48Q8IWZ4 208 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 BEND7Q8N7W2 519 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms