RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 HSCBQ8IWL3 235 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 ELOA2Q8IYF1 753 aaPredicted RBP10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 GALNT16Q8N428 558 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 ZADH2Q8N4Q0 377 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 C3orf20Q8ND61 904 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 PCMTD1Q96MG8 357 aaPredicted RBP10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 PCDHB18PQ96TA0 734 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 OR2AG1Q9H205 316 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 VPS16Q9H269 839 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 DHX35Q9H5Z1 703 aaKnown RBP10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 LATS2Q9NRM7 1088 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 KCND1Q9NSA2 647 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 ADAM22Q9P0K1 906 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 AP4E1Q9UPM8 1137 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 DNAJC16Q9Y2G8 782 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 F8VZ95 297 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 MASP2O00187 686 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 CHUKO15111 745 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 DAPK3O43293 454 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 COX6B1P14854 86 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 UCHL3P15374 230 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 BPIP17213 487 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 HTR1EP28566 365 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 OTX2P32243 289 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 MTIF2P46199 727 aaKnown RBP10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 SPINT3P49223 89 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 ARL4DP49703 201 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 HSD11B2P80365 405 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 OGDHQ02218 1023 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 IHHQ14623 411 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 INSCQ1MX18 579 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 ZNF630Q2M218 657 aaPredicted RBP10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 TDRD12Q587J7 1177 aaKnown RBP10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 RALGPS1Q5JS13 557 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 TRIM72Q6ZMU5 477 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 RAB43Q86YS6 212 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 RBM12BQ8IXT5 1001 aaKnown RBP10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 RAVER1Q8IY67 606 aaKnown RBP10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 NDUFAF2Q8N183 169 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 NXPE1Q8N323 547 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 FAR1Q8WVX9 515 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 RELTQ969Z4 430 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 CLIP3Q96DZ5 547 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 MCEEQ96PE7 176 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 KCTD15Q96SI1 283 aaPredicted RBP10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 CNPY3Q9BT09 278 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 STK33Q9BYT3 514 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 FAM83DQ9H4H8 585 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 DTLQ9NZJ0 730 aa10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 NOVA2Q9UNW9 492 aaKnown RBP10.21□□□□□ -0.77
CTDNEP1-202ENST00000570380 TLCD2A6NGC4 264 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 PRICKLE3O43900 615 aaPredicted RBP10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 MTA2O94776 668 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 GFPT2O94808 682 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 IPO13O94829 963 aaKnown RBP10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 LCA5LO95447 670 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 ZNF7P17097 686 aaPredicted RBP10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 FECHP22830 423 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 IL4RP24394 825 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 DRG2P55039 364 aaKnown RBP10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 ABRQ12979 859 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 NCOA6Q14686 2063 aaPredicted RBP10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 NCF4Q15080 339 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 MAN2A1Q16706 1144 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 DNTTIP2Q5QJE6 756 aaKnown RBP10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 DCAF10Q5QP82 559 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 PPP1R15BQ5SWA1 713 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 WASH2PQ6VEQ5 465 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 BNC2Q6ZN30 1099 aaPredicted RBP10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 MRGPREQ86SM8 312 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 ADGRG6Q86SQ4 1221 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 PHF13Q86YI8 300 aaPredicted RBP10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 PARP9Q8IXQ6 854 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 SYTL1Q8IYJ3 562 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 MMP21Q8N119 569 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 TTC30BQ8N4P2 665 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 CLEC1AQ8NC01 280 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 OR8K5Q8NH50 307 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 CPT1BQ92523 772 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 TM9SF4Q92544 642 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 CXorf40BQ96DE9 158 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 FER1L6-AS2Q96M78 137 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 TRAPPC9Q96Q05 1148 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 PEBP4Q96S96 227 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 WDR77Q9BQA1 342 aaPredicted RBP10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 SNRNP25Q9BV90 132 aaKnown RBP10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 NDST4Q9H3R1 872 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 TRIM39Q9HCM9 518 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 CHST11Q9NPF2 352 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 PCMTD2Q9NV79 361 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 TRIM10Q9UDY6 481 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 RWDD2AQ9UIY3 292 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 WDR37Q9Y2I8 494 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 ATP6V1DQ9Y5K8 247 aa10.2□□□□□ -0.78
CTDNEP1-202ENST00000570380 A0A1W2PQJ5 194 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 UBA6A0AVT1 1052 aaPredicted RBP10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 GOLGA6L4A6NEF3 574 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 EIF3CLB5ME19 914 aaKnown RBP10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 KMOO15229 486 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 DDX3YO15523 660 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms