RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 SRSF7Q16629 238 aaKnown RBP eCLIP3.74□□□□□ -1.81
UBR1-211ENST00000569971 PCGF3Q3KNV8 242 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 ATL3Q6DD88 541 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 ZNF788Q6ZQV5 615 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 TRILQ7L0X0 811 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 BHLHA9Q7RTU4 235 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 ATG9AQ7Z3C6 839 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 ZNF589Q86UQ0 364 aaPredicted RBP3.74□□□□□ -1.81
UBR1-211ENST00000569971 MINDY1Q8N5J2 469 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 SLC44A5Q8NCS7 719 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 OR8K5Q8NH50 307 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 TMEM174Q8WUU8 243 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 DPF1Q92782 380 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 CCDC34Q96HJ3 373 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 KIFC3Q9BVG8 833 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 POLDIP3Q9BY77 421 aaKnown RBP3.74□□□□□ -1.81
UBR1-211ENST00000569971 ANKRD2Q9GZV1 360 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 ZSCAN16Q9H4T2 348 aaPredicted RBP3.74□□□□□ -1.81
UBR1-211ENST00000569971 CYSLTR2Q9NS75 346 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 CISD1Q9NZ45 108 aaKnown RBP3.74□□□□□ -1.81
UBR1-211ENST00000569971 MSRB1Q9NZV6 116 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 CFAP45Q9UL16 551 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 PPIEQ9UNP9 301 aaKnown RBP3.74□□□□□ -1.81
UBR1-211ENST00000569971 ERVK-11Q9UQG0 969 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 FRMD4BQ9Y2L6 1034 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 COL14A1Q05707 1796 aaKnown RBP3.74□□□□□ -1.81
UBR1-211ENST00000569971 LRP6O75581 1613 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 MAP3K15Q6ZN16 1313 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 CDHR2Q9BYE9 1310 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 SHANK3Q9BYB0 1731 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 A0A0G2JK05 382 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 A0A1W2PR77 199 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 A8MXE2 369 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 ZNF814B7Z6K7 855 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 PPP6CO00743 305 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 VCYO14598 125 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 ATP2A1O14983 1001 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 OGG1O15527 345 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 PFKFB2O60825 505 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 GGPS1O95749 300 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 CAVIN2O95810 425 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 TPM2P07951 284 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 CYC1P08574 325 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 UQCRFS1P1P0C7P4 283 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 ACADLP28330 430 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 ARHGAP25P42331 645 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 PNLIPRP2P54317 469 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 KRTAP10-9P60411 292 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 ID2Q02363 134 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 FOXF2Q12947 444 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 TRDNQ13061 729 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 KCNC3Q14003 757 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 DAZAP2Q15038 168 aaPredicted RBP3.73□□□□□ -1.81
UBR1-211ENST00000569971 EZH2Q15910 746 aaKnown RBP3.73□□□□□ -1.81
UBR1-211ENST00000569971 IMMTQ16891 758 aaKnown RBP3.73□□□□□ -1.81
UBR1-211ENST00000569971 MMEL1Q495T6 779 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 C9orf152Q5JTZ5 239 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 HECTD3Q5T447 861 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 PLEKHA7Q6IQ23 1121 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 ANKRD54Q6NXT1 300 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 PQLC2Q6ZP29 291 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 SLC16A12Q6ZSM3 486 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 MTSS1LQ765P7 747 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 GALNTL5Q7Z4T8 443 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 CAMK1DQ8IU85 385 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 GALNT13Q8IUC8 556 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 CNGA4Q8IV77 575 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 MB21D2Q8IYB1 491 aaPredicted RBP3.73□□□□□ -1.81
UBR1-211ENST00000569971 SCYL3Q8IZE3 742 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 TEX45Q8NA69 505 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 OR6J1Q8NGC5 347 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 DUSP19Q8WTR2 217 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 ERGIC1Q969X5 290 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 VPS33AQ96AX1 596 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 ZNF274Q96GC6 653 aaPredicted RBP3.73□□□□□ -1.81
UBR1-211ENST00000569971 VCPIP1Q96JH7 1222 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 EGLN2Q96KS0 407 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 SPATA17Q96L03 361 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 HARBI1Q96MB7 349 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 ZNF396Q96N95 335 aaPredicted RBP3.73□□□□□ -1.81
UBR1-211ENST00000569971 ACOX2Q99424 681 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 WDR77Q9BQA1 342 aaPredicted RBP3.73□□□□□ -1.81
UBR1-211ENST00000569971 CCDC106Q9BWC9 280 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 C1QTNF1Q9BXJ1 281 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 SLC29A3Q9BZD2 475 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 SEMA4CQ9C0C4 833 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 TNMDQ9H2S6 317 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 OPA3Q9H6K4 179 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 MAP6D1Q9H9H5 199 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 MKKSQ9NPJ1 570 aaPredicted RBP3.73□□□□□ -1.81
UBR1-211ENST00000569971 NRIP3Q9NQ35 241 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 DDX19AQ9NUU7 478 aaKnown RBP3.73□□□□□ -1.81
UBR1-211ENST00000569971 MTMR10Q9NXD2 777 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 ZNF112Q9UJU3 913 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 NAP1L2Q9ULW6 460 aaPredicted RBP3.73□□□□□ -1.81
UBR1-211ENST00000569971 EXO1Q9UQ84 846 aaKnown RBP3.73□□□□□ -1.81
UBR1-211ENST00000569971 CCL27Q9Y4X3 112 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 STRCQ7RTU9 1775 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 TOGARAM1Q9Y4F4 1720 aa3.73□□□□□ -1.81
UBR1-211ENST00000569971 WDR19Q8NEZ3 1342 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms