RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 TFB2MQ9H5Q4 396 aaKnown RBP8.67□□□□□ -1.02
LINC00558-201ENST00000569422 CAAP1Q9H8G2 361 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 PRM3Q9NNZ6 103 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 ANKRD12Q6UB98 2062 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 TET1Q8NFU7 2136 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 C7orf72A4D263 438 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 WISP3O95389 354 aaPredicted RBP8.67□□□□□ -1.02
LINC00558-201ENST00000569422 CLPTM1O96005 669 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 ALDH1A1P00352 501 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 ZDHHC11BP0C7U3 371 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 GJA1P17302 382 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 OGNP20774 298 aaKnown RBP8.67□□□□□ -1.02
LINC00558-201ENST00000569422 GDF5P43026 501 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 TUFMP49411 452 aaKnown RBP8.67□□□□□ -1.02
LINC00558-201ENST00000569422 HK3P52790 923 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 INHBCP55103 352 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 RHDQ02161 417 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 PLOD1Q02809 727 aaPredicted RBP8.67□□□□□ -1.02
LINC00558-201ENST00000569422 ACVR1Q04771 509 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 CDH18Q13634 790 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 RFTN1Q14699 578 aaPredicted RBP8.67□□□□□ -1.02
LINC00558-201ENST00000569422 USP41Q3LFD5 358 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 CTSL3PQ5NE16 218 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 SAMD4BQ5PRF9 694 aaKnown RBP8.67□□□□□ -1.02
LINC00558-201ENST00000569422 ADGRF1Q5T601 910 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 TMEM102Q8N9M5 508 aaPredicted RBP8.67□□□□□ -1.02
LINC00558-201ENST00000569422 SUN5Q8TC36 379 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 DLG3Q92796 817 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 SLCO4A1Q96BD0 722 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 BOCQ9BWV1 1114 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 ADGRE3Q9BY15 652 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 TNKS2Q9H2K2 1166 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 MYO16Q9Y6X6 1858 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 A0A1B0GVM2 712 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 FFAR3O14843 346 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 TRIM24O15164 1050 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 INPP4BO15327 924 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 GPR42O15529 346 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 INMTO95050 263 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 GGT5P36269 586 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 NKX3-2P78367 333 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 ELAVL2Q12926 359 aaKnown RBP8.67□□□□□ -1.02
LINC00558-201ENST00000569422 BFSP2Q13515 415 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 LAMB3Q13751 1172 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 LRRC73Q5JTD7 316 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 TBCELQ5QJ74 424 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 C6orf10Q5SRN2 563 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 PTRHD1Q6GMV3 140 aaKnown RBP8.67□□□□□ -1.02
LINC00558-201ENST00000569422 ZBTB49Q6ZSB9 765 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 ADCY4Q8NFM4 1077 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 GPR150Q8NGU9 434 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 GRIN3AQ8TCU5 1115 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 DDI1Q8WTU0 396 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 SEPHS2Q99611 448 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 CLSTN3Q9BQT9 956 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 TMEM79Q9BSE2 394 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 OSBPL10Q9BXB5 764 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 SPATA16Q9BXB7 569 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 SUCOQ9UBS9 1254 aaKnown RBP8.67□□□□□ -1.02
LINC00558-201ENST00000569422 FAM8A1Q9UBU6 413 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 AFF4Q9UHB7 1163 aaKnown RBP8.67□□□□□ -1.02
LINC00558-201ENST00000569422 ZNF225Q9UK10 706 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 CNOT6Q9ULM6 557 aaKnown RBP8.67□□□□□ -1.02
LINC00558-201ENST00000569422 PKP3Q9Y446 797 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 NLRC5Q86WI3 1866 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 LCHNA4D1U4 455 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 SMAD6O43541 496 aaKnown RBP8.66□□□□□ -1.02
LINC00558-201ENST00000569422 SYNCRIPO60506 623 aaKnown RBP8.66□□□□□ -1.02
LINC00558-201ENST00000569422 CHEK2O96017 543 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 HSPA8P11142 646 aaKnown RBP8.66□□□□□ -1.02
LINC00558-201ENST00000569422 HMGA1P17096 107 aaKnown RBP8.66□□□□□ -1.02
LINC00558-201ENST00000569422 CA5AP35218 305 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 SLC26A3P40879 764 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 CSKP41240 450 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 KCNK10P57789 538 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 XIAPP98170 497 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 MYBPC1Q00872 1141 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 PAGE3Q5JUK9 113 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 KANK2Q63ZY3 851 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 KRT80Q6KB66 452 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 CXorf57Q6NSI4 855 aaKnown RBP8.66□□□□□ -1.02
LINC00558-201ENST00000569422 IL27RAQ6UWB1 636 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 RALGPS2Q86X27 583 aaPredicted RBP8.66□□□□□ -1.02
LINC00558-201ENST00000569422 SLC15A3Q8IY34 581 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 METTL6Q8TCB7 284 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 MTFMTQ96DP5 389 aaKnown RBP8.66□□□□□ -1.02
LINC00558-201ENST00000569422 BTBD9Q96Q07 612 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 EGFL8Q99944 293 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 INTS10Q9NVR2 710 aaKnown RBP8.66□□□□□ -1.02
LINC00558-201ENST00000569422 TMEM181Q9P2C4 612 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 RNF103-CHMP3A0A140T963 221 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 ILVBLA1L0T0 632 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 SYCE1LA8MT33 242 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 TBC1D4O60343 1298 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 CLIC3O95833 236 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 CYBBP04839 570 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 HTR6P50406 440 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 GALNT1Q10472 559 aaPredicted RBP8.66□□□□□ -1.02
LINC00558-201ENST00000569422 TYSND1Q2T9J0 566 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 RBM44Q6ZP01 1051 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms