RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 DOLKQ9UPQ8 538 aa12.42□□□□□ -0.42
NSMCE1-214ENST00000569236 SLC17A4Q9Y2C5 497 aa12.42□□□□□ -0.42
NSMCE1-214ENST00000569236 C2orf81A6NN90 581 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 LMO7DNF2Z398 122 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 TPP1O14773 563 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 STX7O15400 261 aaKnown RBP12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 BUD23O43709 281 aaKnown RBP12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 AVILO75366 819 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 CRTAMO95727 393 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 ANXA6P08133 673 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 FTH1P19P0C7X4 201 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 GIMD1P0DJR0 217 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 LPOP22079 712 aaPredicted RBP12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 STX2P32856 288 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 SPAM1P38567 509 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 POLD2P49005 469 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 SARNPP82979 210 aaKnown RBP12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 PDE1BQ01064 536 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 TCEA2Q15560 299 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 DEFB133Q30KQ1 61 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 DENND5AQ6IQ26 1287 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 SDR16C5Q8N3Y7 309 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 SGSM3Q96HU1 749 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 CLPBQ9H078 707 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 SUDS3Q9H7L9 328 aaPredicted RBP12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 SUFUQ9UMX1 484 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 APOBEC2Q9Y235 224 aaKnown RBP12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 TMEM98Q9Y2Y6 226 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 ARL5AQ9Y689 179 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 SPEGQ15772 3267 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 FOXO6A8MYZ6 492 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 YY2O15391 372 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 PRPF4O43172 522 aaKnown RBP eCLIP12.41□□□□□ -0.422e-6■■■□□ 16.3
NSMCE1-214ENST00000569236 ASMTLO95671 621 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 C1QAP02745 245 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 ADRB1P08588 477 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 KRT15P19012 456 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 GNPDA1P46926 289 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 DAB2P98082 770 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 MPP2Q14168 576 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 EFTUD2Q15029 972 aaKnown RBP eCLIP12.41□□□□□ -0.423e-6■■■■■ 41.9
NSMCE1-214ENST00000569236 PROX2Q3B8N5 592 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 ZCCHC8Q6NZY4 707 aaKnown RBP12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 GKN2Q86XP6 184 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 SCG3Q8WXD2 468 aaKnown RBP12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 TMEM168Q9H0V1 697 aa12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 SSU72Q9NP77 194 aaKnown RBP12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 ZC3H7BQ9UGR2 993 aaKnown RBP12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 CNOT6Q9ULM6 557 aaKnown RBP12.41□□□□□ -0.42
NSMCE1-214ENST00000569236 GLYATL1P3A0A0U1RQE8 302 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 MED19A0JLT2 244 aaPredicted RBP12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 SLC25A14O95258 325 aaPredicted RBP12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 FUCA1P04066 466 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 CELA2BP08218 269 aaPredicted RBP12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 CKMT2P17540 419 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 DRD4P21917 467 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 CDH17Q12864 832 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 DNAJC3Q13217 504 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 MSLNQ13421 630 aaPredicted RBP12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 LVRNQ6Q4G3 990 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 MARK2Q7KZI7 788 aaKnown RBP12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 DNAAF3Q8N9W5 541 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 FAM181AQ8N9Y4 354 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 OR4K2Q8NGD2 314 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 DTX3LQ8TDB6 740 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 MZB1Q8WU39 189 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 PTCD2Q8WV60 388 aaKnown RBP12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 DCAKDQ8WVC6 231 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 SLC44A1Q8WWI5 657 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 GLYATL1Q969I3 302 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 SIGLEC10Q96LC7 697 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 APOLD1Q96LR9 279 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 SMC6Q96SB8 1091 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 KCNK9Q9NPC2 374 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 IL26Q9NPH9 171 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 TRNAU1APQ9NX07 287 aaKnown RBP12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 TOR4AQ9NXH8 423 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 NKIRAS1Q9NYS0 192 aa12.4□□□□□ -0.42
NSMCE1-214ENST00000569236 BPTFQ12830 3046 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 SUN1O94901 812 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 TRIM16O95361 564 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 TPH1P17752 444 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 MSH2P43246 934 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 FOXK2Q01167 660 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 ILF3Q12906 894 aaKnown RBP eCLIP12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 PTPRCAPQ14761 206 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 KBTBD12Q3ZCT8 623 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 ATP13A5Q4VNC0 1218 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 CCDC157Q569K6 752 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 C6orf132Q5T0Z8 1188 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 FAM151BQ6UXP7 276 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 TAF8Q7Z7C8 310 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 SLCO6A1Q86UG4 719 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 GALNT13Q8IUC8 556 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 PHYKPLQ8IUZ5 450 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 OR52K1Q8NGK4 314 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 DYDC1Q8WWB3 177 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 GLMNQ92990 594 aa12.39□□□□□ -0.43
NSMCE1-214ENST00000569236 SCARF2Q96GP6 870 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms