RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 SNRPB2P08579 225 aaKnown RBP15.85■□□□□ 0.13
CLK3-223ENST00000568488 BRAFP15056 766 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 ZNF7P17097 686 aaPredicted RBP15.85■□□□□ 0.13
CLK3-223ENST00000568488 IDSP22304 550 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 OTX2P32243 289 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 CA5AP35218 305 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 POLR2FP61218 127 aaKnown RBP15.85■□□□□ 0.13
CLK3-223ENST00000568488 TUBB4BP68371 445 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 HSD11B2P80365 405 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 TUBB2AQ13885 445 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 PPP1R15BQ5SWA1 713 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 PLEKHS1Q5SXH7 462 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 PRAMEF17Q5VTA0 474 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 ABRAXAS1Q6UWZ7 409 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 MON1BQ7L1V2 547 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 CUZD1Q86UP6 607 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 FJX1Q86VR8 437 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 KCNMB4Q86W47 210 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 ATPAF2Q8N5M1 289 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 CLIP3Q96DZ5 547 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 BARD1Q99728 777 aaKnown RBP15.85■□□□□ 0.13
CLK3-223ENST00000568488 TUBB2BQ9BVA1 445 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 PKD2L2Q9NZM6 624 aa15.85■□□□□ 0.13
CLK3-223ENST00000568488 KMOO15229 486 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 DDX3YO15523 660 aaKnown RBP15.84■□□□□ 0.13
CLK3-223ENST00000568488 PRPSAP2O60256 369 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 DIAPH2O60879 1101 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 AMPD1P23109 780 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 IL4RP24394 825 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 ANO6Q4KMQ2 910 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 DNTTIP2Q5QJE6 756 aaKnown RBP15.84■□□□□ 0.13
CLK3-223ENST00000568488 TMTC4Q5T4D3 741 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 KLHL35Q6PF15 583 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 ADGRG6Q86SQ4 1221 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 KMT5CQ86Y97 462 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 RAB43Q86YS6 212 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 DSELQ8IZU8 1212 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 CCHCR1Q8TD31 782 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 CPT1BQ92523 772 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 TM9SF4Q92544 642 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 SPATA16Q9BXB7 569 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 TRIM39Q9HCM9 518 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 DTLQ9NZJ0 730 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 PCDHGA10Q9Y5H3 936 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 ADGRG1Q9Y653 693 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 POLEQ07864 2286 aa15.84■□□□□ 0.13
CLK3-223ENST00000568488 FECHP22830 423 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 HCAR3P49019 387 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 KLK7P49862 253 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 CDH6P55285 790 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 DPYSQ14117 519 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 MYBPC3Q14896 1274 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 ANKRD20A8PQ5CZ79 823 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 ZNF569Q5MCW4 686 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 ALS2CLQ60I27 953 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 TMCO3Q6UWJ1 677 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 IGFL3Q6UXB1 125 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 Q6ZS92 163 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 LRRTM4Q86VH4 590 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 RAVER1Q8IY67 606 aaKnown RBP15.83■□□□□ 0.12
CLK3-223ENST00000568488 GALNT16Q8N428 558 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 D2HGDHQ8N465 521 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 CLEC1AQ8NC01 280 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 LPCAT1Q8NF37 534 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 ZNF501Q96CX3 271 aaPredicted RBP15.83■□□□□ 0.12
CLK3-223ENST00000568488 GANQ9H2C0 597 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 ZWILCHQ9H900 591 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 ETNK2Q9NVF9 386 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 SOHLH2Q9NX45 425 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 TTLL3Q9Y4R7 772 aa15.83■□□□□ 0.12
CLK3-223ENST00000568488 MDC1Q14676 2089 aaKnown RBP15.83■□□□□ 0.12
CLK3-223ENST00000568488 PIKFYVEQ9Y2I7 2098 aa15.82■□□□□ 0.12
CLK3-223ENST00000568488 RNF8O76064 485 aa15.82■□□□□ 0.12
CLK3-223ENST00000568488 HALP42357 657 aa15.82■□□□□ 0.12
CLK3-223ENST00000568488 DSC2Q02487 901 aa15.82■□□□□ 0.12
CLK3-223ENST00000568488 PLCL1Q15111 1095 aa15.82■□□□□ 0.12
CLK3-223ENST00000568488 OR8K5Q8NH50 307 aa15.82■□□□□ 0.12
CLK3-223ENST00000568488 FER1L6-AS2Q96M78 137 aa15.82■□□□□ 0.12
CLK3-223ENST00000568488 LRFN5Q96NI6 719 aa15.82■□□□□ 0.12
CLK3-223ENST00000568488 TIMM29Q9BSF4 260 aa15.82■□□□□ 0.12
CLK3-223ENST00000568488 SLC7A5P2Q9GIP4 190 aa15.82■□□□□ 0.12
CLK3-223ENST00000568488 POLR1EQ9GZS1 481 aaKnown RBP15.82■□□□□ 0.12
CLK3-223ENST00000568488 ZNF552Q9H707 407 aaPredicted RBP15.82■□□□□ 0.12
CLK3-223ENST00000568488 ZBTB20Q9HC78 741 aaPredicted RBP15.82■□□□□ 0.12
CLK3-223ENST00000568488 WDR37Q9Y2I8 494 aa15.82■□□□□ 0.12
CLK3-223ENST00000568488 A0A1B0GUH1 482 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 RGSL1A5PLK6 1076 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 TLCD2A6NGC4 264 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 GPR89AB7ZAQ6 455 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 H3BRJ5 948 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 CHUKO15111 745 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 LDB2O43679 373 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 KLHL41O60662 606 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 MTX2O75431 263 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 IPO13O94829 963 aaKnown RBP15.81■□□□□ 0.12
CLK3-223ENST00000568488 LCA5LO95447 670 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 CAPN1P07384 714 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 GPR89BP0CG08 455 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 ATXN8OSP0DMR3 200 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 MIPP30301 263 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms