RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 GRM1Q13255 1194 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 ARHGEF7Q14155 803 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 ATP6AP1Q15904 470 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 KYAT1Q16773 422 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 FAM174BQ3ZCQ3 159 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 RBM48Q5RL73 367 aaKnown RBP10.8□□□□□ -0.68
PALB2-206ENST00000568219 LRRC49Q8IUZ0 686 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 TSSK3Q96PN8 268 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 GFM1Q96RP9 751 aaKnown RBP10.8□□□□□ -0.68
PALB2-206ENST00000568219 COPS4Q9BT78 406 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 REEP1Q9H902 201 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 STMN3Q9NZ72 180 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 DUSP12Q9UNI6 340 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 PRKAB1Q9Y478 270 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 CDK14O94921 469 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 EIF2S1P05198 315 aaKnown RBP10.8□□□□□ -0.68
PALB2-206ENST00000568219 GABRB3P28472 473 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 MBTD1Q05BQ5 628 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 CPSF6Q16630 551 aaKnown RBP eCLIP10.8□□□□□ -0.68
PALB2-206ENST00000568219 ANKRD34AQ69YU3 496 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 DESI1Q6ICB0 168 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 TICAM1Q8IUC6 712 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 EPHX4Q8IUS5 362 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 ZNF486Q96H40 463 aaPredicted RBP10.8□□□□□ -0.68
PALB2-206ENST00000568219 YME1L1Q96TA2 773 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 YTHDF1Q9BYJ9 559 aaKnown RBP10.8□□□□□ -0.68
PALB2-206ENST00000568219 ATP13A3Q9H7F0 1226 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 FAM118AQ9NWS6 357 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 PAK1IP1Q9NWT1 392 aaPredicted RBP10.8□□□□□ -0.68
PALB2-206ENST00000568219 ERVK13-1Q9NX77 482 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 MTMR10Q9NXD2 777 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 GMIPQ9P107 970 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 EIF2B4Q9UI10 523 aaKnown RBP10.8□□□□□ -0.68
PALB2-206ENST00000568219 PARP4Q9UKK3 1724 aaKnown RBP10.8□□□□□ -0.68
PALB2-206ENST00000568219 ELOVL7A1L3X0 281 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 A8MX80 341 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 H3BRB1 525 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 M0QZ92 97 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 ZNF701M0R085 212 aaPredicted RBP10.8□□□□□ -0.68
PALB2-206ENST00000568219 SERPINA1P01009 418 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 C1QAP02745 245 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 RENBPP51606 427 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 CTBSQ01459 385 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 DSC2Q02487 901 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 TUBA3CQ13748 450 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 INAVAQ3KP66 663 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 ZNF404Q494X3 552 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 ZNF605Q86T29 641 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 ALDH16A1Q8IZ83 802 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 NPWQ8N729 165 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 NUDT8Q8WV74 236 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 CEP295NLQ96MC4 621 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 CDK5RAP1Q96SZ6 601 aaKnown RBP10.8□□□□□ -0.68
PALB2-206ENST00000568219 MOV10Q9HCE1 1003 aaKnown RBP10.8□□□□□ -0.68
PALB2-206ENST00000568219 TNFRSF12AQ9NP84 129 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 STX7O15400 261 aaKnown RBP10.79□□□□□ -0.68
PALB2-206ENST00000568219 CD3EAPO15446 510 aaKnown RBP10.79□□□□□ -0.68
PALB2-206ENST00000568219 ALDOCP09972 364 aaKnown RBP10.79□□□□□ -0.68
PALB2-206ENST00000568219 MAGEA3P43357 314 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 AGTR2P50052 363 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 HERVK_113P63132 956 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 LCP2Q13094 533 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 ENPP6Q6UWR7 440 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 MFSD2AQ8NA29 543 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 TTC29Q8NA56 475 aaPredicted RBP10.79□□□□□ -0.68
PALB2-206ENST00000568219 CHST13Q8NET6 341 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 FCRL2Q96LA5 508 aaPredicted RBP10.79□□□□□ -0.68
PALB2-206ENST00000568219 ERVK-6Q9BXR3 956 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 TRIM54Q9BYV2 358 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 OSBPL2Q9H1P3 480 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 FZD8Q9H461 694 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 NOX1Q9Y5S8 564 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 DNMT3AQ9Y6K1 912 aaPredicted RBP10.79□□□□□ -0.68
PALB2-206ENST00000568219 CCDC182A6NF36 153 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 DPYSL4O14531 572 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 CHRNA1P02708 482 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 MT-ND2P03891 347 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 FYNP06241 537 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 HOXD11P31277 338 aaPredicted RBP10.79□□□□□ -0.68
PALB2-206ENST00000568219 S100A3P33764 101 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 TGFBR1P36897 503 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 ALDH7A1P49419 539 aaKnown RBP10.79□□□□□ -0.68
PALB2-206ENST00000568219 CASP9P55211 416 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 ENPEPQ07075 957 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 TJAP1Q5JTD0 557 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 PAQR3Q6TCH7 311 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 GALNT10Q86SR1 603 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 UNC93AQ86WB7 457 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 RAB43Q86YS6 212 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 HID1Q8IV36 788 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 ASCC1Q8N9N2 400 aaKnown RBP10.79□□□□□ -0.68
PALB2-206ENST00000568219 OR13F1Q8NGS4 319 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 SEMA3CQ99985 751 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 TUBA1CQ9BQE3 449 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 IL37Q9NZH6 218 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 DNAJB9Q9UBS3 223 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 MARF1Q9Y4F3 1742 aaKnown RBP10.79□□□□□ -0.68
PALB2-206ENST00000568219 LCKP06239 509 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 BMP4P12644 408 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 MAGEA6P43360 314 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms