RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 LRRTM4Q86VH4 590 aa17.74■□□□□ 0.43
COMMD4-222ENST00000568034 KIAA2013Q8IYS2 634 aa17.74■□□□□ 0.43
COMMD4-222ENST00000568034 CLDN19Q8N6F1 224 aa17.74■□□□□ 0.43
COMMD4-222ENST00000568034 EIF1ADQ8N9N8 165 aaKnown RBP17.74■□□□□ 0.43
COMMD4-222ENST00000568034 LMX1AQ8TE12 382 aa17.74■□□□□ 0.43
COMMD4-222ENST00000568034 LPGAT1Q92604 370 aa17.74■□□□□ 0.43
COMMD4-222ENST00000568034 SGF29Q96ES7 293 aa17.74■□□□□ 0.43
COMMD4-222ENST00000568034 IARS2Q9NSE4 1012 aaKnown RBP17.74■□□□□ 0.43
COMMD4-222ENST00000568034 SPASTQ9UBP0 616 aa17.74■□□□□ 0.43
COMMD4-222ENST00000568034 GULP1Q9UBP9 304 aa17.74■□□□□ 0.43
COMMD4-222ENST00000568034 SLC23A2Q9UGH3 650 aa17.74■□□□□ 0.43
COMMD4-222ENST00000568034 GPSM3Q9Y4H4 160 aa17.74■□□□□ 0.43
COMMD4-222ENST00000568034 CFAP99D6REC4 459 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 S1PR4O95977 384 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 FAM153BP0C7A2 387 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 AK4P27144 223 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-222ENST00000568034 NSG1P42857 185 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 TTPAP49638 278 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 PRLHRP49683 370 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 LIMK1P53667 647 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 TUBB4BP68371 445 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 MPP1Q00013 466 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 CTBSQ01459 385 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 THOC5Q13769 683 aaKnown RBP17.73■□□□□ 0.43
COMMD4-222ENST00000568034 PLA2G4EQ3MJ16 856 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 FAM153CQ494X1 144 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 ZNF658BQ4V348 819 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-222ENST00000568034 TMEM220Q6QAJ8 160 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 CAPN12Q6ZSI9 719 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 TRAPPC5Q8IUR0 188 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 LMNTD2Q8IXW0 634 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 OTUD6BQ8N6M0 293 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 BEND7Q8N7W2 519 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-222ENST00000568034 DCUN1D1Q96GG9 259 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 LINC00615Q96LM1 132 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-222ENST00000568034 TTC25Q96NG3 672 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 TIMM29Q9BSF4 260 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 FAM167BQ9BTA0 163 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 P2RY12Q9H244 342 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 CDC42EP4Q9H3Q1 356 aaKnown RBP17.73■□□□□ 0.43
COMMD4-222ENST00000568034 SMYD2Q9NRG4 433 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 NINJ2Q9NZG7 142 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 ZNHIT2Q9UHR6 403 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 GPR34Q9UPC5 381 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 BTBD3Q9Y2F9 522 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 CSNK1G3Q9Y6M4 447 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 PIKFYVEQ9Y2I7 2098 aa17.73■□□□□ 0.43
COMMD4-222ENST00000568034 CEP250Q9BV73 2442 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 ZFC3H1O60293 1989 aaKnown RBP17.72■□□□□ 0.43
COMMD4-222ENST00000568034 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.72■□□□□ 0.43
COMMD4-222ENST00000568034 TCRBV9S1A1TA0A576 114 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 KMOO15229 486 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 AP2A2O94973 939 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 RALBP11234 206 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 ACP5P13686 325 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 CTSEP14091 401 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 VSNL1P62760 191 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 SLC14A1Q13336 389 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 CTBP1Q13363 440 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 LRP8Q14114 963 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 ERCC6LQ2NKX8 1250 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 TEDDM1Q5T9Z0 273 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 CHST15Q7LFX5 561 aaPredicted RBP17.72■□□□□ 0.43
COMMD4-222ENST00000568034 FSTL5Q8N475 847 aaPredicted RBP17.72■□□□□ 0.43
COMMD4-222ENST00000568034 C2CD4AQ8NCU7 369 aaPredicted RBP17.72■□□□□ 0.43
COMMD4-222ENST00000568034 LKAAEAR1Q8TD35 194 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 CALML6Q8TD86 181 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 SCG3Q8WXD2 468 aaKnown RBP17.72■□□□□ 0.43
COMMD4-222ENST00000568034 ZNF514Q96K75 400 aaPredicted RBP17.72■□□□□ 0.43
COMMD4-222ENST00000568034 TCF12Q99081 682 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 TXLNGYQ9BZA5 131 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 TSPYL1Q9H0U9 437 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 FBXO6Q9NRD1 293 aaPredicted RBP17.72■□□□□ 0.43
COMMD4-222ENST00000568034 FBXO5Q9UKT4 447 aa17.72■□□□□ 0.43
COMMD4-222ENST00000568034 LMO7DNF2Z398 122 aa17.71■□□□□ 0.43
COMMD4-222ENST00000568034 TRIM38O00635 465 aa17.71■□□□□ 0.43
COMMD4-222ENST00000568034 PRMT5O14744 637 aaPredicted RBP17.71■□□□□ 0.43
COMMD4-222ENST00000568034 YY2O15391 372 aa17.71■□□□□ 0.43
COMMD4-222ENST00000568034 POP7O75817 140 aaKnown RBP17.71■□□□□ 0.43
COMMD4-222ENST00000568034 GSTA2P09210 222 aa17.71■□□□□ 0.43
COMMD4-222ENST00000568034 ZNF7P17097 686 aaPredicted RBP17.71■□□□□ 0.43
COMMD4-222ENST00000568034 RPS3P23396 243 aaKnown RBP eCLIP17.71■□□□□ 0.43
COMMD4-222ENST00000568034 GABRB3P28472 473 aa17.71■□□□□ 0.43
COMMD4-222ENST00000568034 PMLP29590 882 aa17.71■□□□□ 0.43
COMMD4-222ENST00000568034 CLCNKAP51800 687 aa17.71■□□□□ 0.43
COMMD4-222ENST00000568034 MGAT5Q09328 741 aa17.71■□□□□ 0.43
COMMD4-222ENST00000568034 ELOCQ15369 112 aa17.71■□□□□ 0.43
COMMD4-222ENST00000568034 UAP1L1Q3KQV9 507 aa17.71■□□□□ 0.43
COMMD4-222ENST00000568034 CTSL3PQ5NE16 218 aa17.71■□□□□ 0.43
COMMD4-222ENST00000568034 RNF187Q5TA31 235 aaPredicted RBP17.71■□□□□ 0.43
COMMD4-222ENST00000568034 CEP128Q6ZU80 1094 aa17.71■□□□□ 0.43
COMMD4-222ENST00000568034 C3orf62Q6ZUJ4 267 aa17.71■□□□□ 0.43
COMMD4-222ENST00000568034 CYS1Q717R9 158 aa17.71■□□□□ 0.43
COMMD4-222ENST00000568034 SDCCAG8Q86SQ7 713 aaPredicted RBP17.71■□□□□ 0.43
COMMD4-222ENST00000568034 PALM2Q8IXS6 379 aa17.71■□□□□ 0.43
COMMD4-222ENST00000568034 UBXN4Q92575 508 aa17.71■□□□□ 0.43
COMMD4-222ENST00000568034 BIRC8Q96P09 236 aa17.71■□□□□ 0.43
COMMD4-222ENST00000568034 TTC1Q99614 292 aa17.71■□□□□ 0.43
COMMD4-222ENST00000568034 INTS10Q9NVR2 710 aaKnown RBP17.71■□□□□ 0.43
COMMD4-222ENST00000568034 KCNK6Q9Y257 313 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms