RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 FOXN2P32314 431 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 ELF1P32519 619 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 ELK3P41970 407 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 MAGEA3P43357 314 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 NEK3P51956 506 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 ARFIP2P53365 341 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 OSTNP61366 133 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 YWHAGP61981 247 aaKnown RBP eCLIP5.33□□□□□ -1.56
CAPN3-217ENST00000567817 MXRA7P84157 204 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 ILF2Q12905 390 aaKnown RBP5.33□□□□□ -1.56
CAPN3-217ENST00000567817 SEMA5AQ13591 1074 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 FRG1Q14331 258 aaKnown RBP5.33□□□□□ -1.56
CAPN3-217ENST00000567817 CRYMQ14894 314 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 GPNMBQ14956 572 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 UBXN2BQ14CS0 331 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 FASTKD3Q14CZ7 662 aaKnown RBP5.33□□□□□ -1.56
CAPN3-217ENST00000567817 ANGPT1Q15389 498 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 INSCQ1MX18 579 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 GOLGA7BQ2TAP0 167 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 DNAL1Q4LDG9 190 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 FBXO47Q5MNV8 452 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 FNBP1LQ5T0N5 605 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 UBAP2Q5T6F2 1119 aaKnown RBP5.33□□□□□ -1.56
CAPN3-217ENST00000567817 C6orf163Q5TEZ5 329 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 ANKRD22Q5VYY1 191 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 CGB2Q6NT52 195 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 ZNF529Q6P280 563 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 FAM47EQ6ZV65 393 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 FAM183BPQ6ZVS7 135 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 MED25Q71SY5 747 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 OTOAQ7RTW8 1153 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 TMCO2Q7Z6W1 182 aaPredicted RBP5.33□□□□□ -1.56
CAPN3-217ENST00000567817 CLNKQ7Z7G1 428 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 LCA5Q86VQ0 697 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 KIAA2013Q8IYS2 634 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 KIAA0319LQ8IZA0 1049 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 CRYBG2Q8N1P7 616 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 TEX9Q8N6V9 391 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 EMC1Q8N766 993 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 ENDOVQ8N8Q3 282 aaKnown RBP5.33□□□□□ -1.56
CAPN3-217ENST00000567817 GLIS1Q8NBF1 620 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 OR56A1Q8NGH5 318 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 TCP10LQ8TDR4 215 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 FAM172AQ8WUF8 416 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 CENPIQ92674 756 aaPredicted RBP5.33□□□□□ -1.56
CAPN3-217ENST00000567817 HDAC10Q969S8 669 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 RMDN2Q96LZ7 410 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 TEKT5Q96M29 485 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 NECTIN4Q96NY8 510 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 QKIQ96PU8 341 aaKnown RBP eCLIP5.33□□□□□ -1.56
CAPN3-217ENST00000567817 TWNKQ96RR1 684 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 VAT1Q99536 393 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 FAM118BQ9BPY3 351 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 RTKNQ9BST9 563 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 TEX101Q9BY14 249 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 SLC13A1Q9BZW2 595 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 TRIM6Q9C030 488 aaPredicted RBP5.33□□□□□ -1.56
CAPN3-217ENST00000567817 WWP1Q9H0M0 922 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 MYLK2Q9H1R3 596 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 USP29Q9HBJ7 922 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 MLXIPLQ9NP71 852 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 MRGBPQ9NV56 204 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 ETNK2Q9NVF9 386 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.33□□□□□ -1.56
CAPN3-217ENST00000567817 GDAP2Q9NXN4 497 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 RRN3Q9NYV6 651 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 DKK2Q9UBU2 259 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 SLC23A1Q9UHI7 598 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 CYTH4Q9UIA0 394 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 MID2Q9UJV3 735 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 CHKBQ9Y259 395 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 C15orf41Q9Y2V0 281 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 PCDHGA9Q9Y5G4 932 aaKnown RBP5.33□□□□□ -1.56
CAPN3-217ENST00000567817 PCDHGA8Q9Y5G5 932 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 PCDHGA7Q9Y5G6 932 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 PCDHGA6Q9Y5G7 932 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 PCDHGA3Q9Y5H0 932 aa5.33□□□□□ -1.56
CAPN3-217ENST00000567817 WDR87Q6ZQQ6 2873 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 ARHGEF37A1IGU5 675 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 MAGEB16A2A368 324 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 FAM159BA6NKW6 160 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 F8W8V4 182 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 GOLGA8MH3BSY2 632 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 XPO1O14980 1071 aaKnown RBP5.32□□□□□ -1.56
CAPN3-217ENST00000567817 SGTAO43765 313 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 KIF1CO43896 1103 aaKnown RBP5.32□□□□□ -1.56
CAPN3-217ENST00000567817 RAMP2O60895 175 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 GLRA3O75311 464 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 SNUPNO95149 360 aaKnown RBP5.32□□□□□ -1.56
CAPN3-217ENST00000567817 APRTP07741 180 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 KRT16P08779 473 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 CD48P09326 243 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 CCDC130P13994 396 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 KCNE1P15382 129 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 HOXB8P17481 243 aaPredicted RBP5.32□□□□□ -1.56
CAPN3-217ENST00000567817 PGAM1P18669 254 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 DDCP20711 480 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 GCSHP23434 173 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 CYP2F1P24903 491 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 ADRA1DP25100 572 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms