RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 EFTUD2Q15029 972 aaKnown RBP eCLIP8.05□□□□□ -1.12
CDH13-208ENST00000566333 ERCC6LQ2NKX8 1250 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 AASDHQ4L235 1098 aaPredicted RBP8.05□□□□□ -1.12
CDH13-208ENST00000566333 BCL7AQ4VC05 210 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 FASTKD1Q53R41 847 aaKnown RBP8.05□□□□□ -1.12
CDH13-208ENST00000566333 HSP90AA5PQ58FG0 334 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 PRRT3Q5FWE3 981 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 AARS2Q5JTZ9 985 aaKnown RBP8.05□□□□□ -1.12
CDH13-208ENST00000566333 CTSL3PQ5NE16 218 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 CERS6Q6ZMG9 384 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 CAPN12Q6ZSI9 719 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 DET1Q7L5Y6 550 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 TAS2R42Q7RTR8 314 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 GATAD2AQ86YP4 633 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 GALNT13Q8IUC8 556 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 TRAPPC5Q8IUR0 188 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 SLC25A45Q8N413 288 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 CLDN19Q8N6F1 224 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 BEND7Q8N7W2 519 aaPredicted RBP8.05□□□□□ -1.12
CDH13-208ENST00000566333 EIF1ADQ8N9N8 165 aaKnown RBP8.05□□□□□ -1.12
CDH13-208ENST00000566333 C2CD4AQ8NCU7 369 aaPredicted RBP8.05□□□□□ -1.12
CDH13-208ENST00000566333 GDAP1Q8TB36 358 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 GPBAR1Q8TDU6 330 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 PYROXD1Q8WU10 500 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.05□□□□□ -1.12
CDH13-208ENST00000566333 TIMM29Q9BSF4 260 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 FAM167BQ9BTA0 163 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 MCMBPQ9BTE3 642 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 EPB41L4BQ9H329 900 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 CDC42EP4Q9H3Q1 356 aaKnown RBP8.05□□□□□ -1.12
CDH13-208ENST00000566333 RMI1Q9H9A7 625 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 LRRC4CQ9HCJ2 640 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 TMEM9BQ9NQ34 198 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 C20orf96Q9NUD7 363 aaPredicted RBP8.05□□□□□ -1.12
CDH13-208ENST00000566333 TRNAU1APQ9NX07 287 aaKnown RBP8.05□□□□□ -1.12
CDH13-208ENST00000566333 MOCS1Q9NZB8 636 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 MTRF1LQ9UGC7 380 aaKnown RBP8.05□□□□□ -1.12
CDH13-208ENST00000566333 SLC23A2Q9UGH3 650 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 BTBD3Q9Y2F9 522 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 MED16Q9Y2X0 877 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 PLEKHM1Q9Y4G2 1056 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 PCDHGB2Q9Y5G2 931 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 PSAT1Q9Y617 370 aa8.05□□□□□ -1.12
CDH13-208ENST00000566333 LY6G6EA0A0G2JKS1 128 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 A6NCN8 305 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 FAM159BA6NKW6 160 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 C4orf47A7E2U8 309 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 CXorf49A8MYA2 514 aaPredicted RBP8.04□□□□□ -1.12
CDH13-208ENST00000566333 LMO7DNF2Z398 122 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 H3BM21 787 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 AQP9O43315 295 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 FOXD2O60548 495 aaPredicted RBP8.04□□□□□ -1.12
CDH13-208ENST00000566333 EML2O95834 649 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 S1PR4O95977 384 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 ACP5P13686 325 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 ATP1B2P14415 290 aaPredicted RBP8.04□□□□□ -1.12
CDH13-208ENST00000566333 MSH3P20585 1137 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 RPS3P23396 243 aaKnown RBP eCLIP8.04□□□□□ -1.12
CDH13-208ENST00000566333 AK4P27144 223 aaPredicted RBP8.04□□□□□ -1.12
CDH13-208ENST00000566333 GABRB3P28472 473 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 NSG1P42857 185 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 TTPAP49638 278 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 BLKP51451 505 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 LIMK1P53667 647 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 ADARP55265 1226 aaKnown RBP8.04□□□□□ -1.12
CDH13-208ENST00000566333 CTBSQ01459 385 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 DMPKQ09013 629 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 CTBP1Q13363 440 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 C1orf61Q13536 156 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 LRP8Q14114 963 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 TEDDM1Q5T9Z0 273 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 RNF187Q5TA31 235 aaPredicted RBP8.04□□□□□ -1.12
CDH13-208ENST00000566333 STPG1Q5TH74 334 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 LYPLAL1Q5VWZ2 237 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 MRNIPQ6NTE8 343 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 WDR93Q6P2C0 686 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 ZNF549Q6P9A3 640 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 ZNF449Q6P9G9 518 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 DBX2Q6ZNG2 339 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 FAM83HQ6ZRV2 1179 aaPredicted RBP8.04□□□□□ -1.12
CDH13-208ENST00000566333 CHST15Q7LFX5 561 aaPredicted RBP8.04□□□□□ -1.12
CDH13-208ENST00000566333 RD3Q7Z3Z2 195 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 GALNT7Q86SF2 657 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 LRRTM4Q86VH4 590 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 SFTPA2Q8IWL1 248 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 LMNTD2Q8IXW0 634 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 KIAA2013Q8IYS2 634 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 OTUD6BQ8N6M0 293 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 BAHD1Q8TBE0 780 aaPredicted RBP8.04□□□□□ -1.12
CDH13-208ENST00000566333 LMX1AQ8TE12 382 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 SCG3Q8WXD2 468 aaKnown RBP8.04□□□□□ -1.12
CDH13-208ENST00000566333 SGF29Q96ES7 293 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 LINC00615Q96LM1 132 aaPredicted RBP8.04□□□□□ -1.12
CDH13-208ENST00000566333 BIRC8Q96P09 236 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 FUT8Q9BYC5 575 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 SLC13A1Q9BZW2 595 aa8.04□□□□□ -1.12
CDH13-208ENST00000566333 FBXO6Q9NRD1 293 aaPredicted RBP8.04□□□□□ -1.12
CDH13-208ENST00000566333 IARS2Q9NSE4 1012 aaKnown RBP8.04□□□□□ -1.12
CDH13-208ENST00000566333 INTS10Q9NVR2 710 aaKnown RBP8.04□□□□□ -1.12
CDH13-208ENST00000566333 MOSPD1Q9UJG1 213 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms