RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 FSD1Q9BTV5 496 aa2.36□□□□□ -2.03
SUB1P3-201ENST00000564581 GLIS2Q9BZE0 524 aaPredicted RBP2.36□□□□□ -2.03
SUB1P3-201ENST00000564581 PPP1R3EQ9H7J1 279 aa2.36□□□□□ -2.03
SUB1P3-201ENST00000564581 HCFC1R1Q9NWW0 138 aa2.36□□□□□ -2.03
SUB1P3-201ENST00000564581 HSPB7Q9UBY9 170 aa2.36□□□□□ -2.03
SUB1P3-201ENST00000564581 PGAP2Q9UHJ9 254 aa2.36□□□□□ -2.03
SUB1P3-201ENST00000564581 HSF4Q9ULV5 492 aa2.36□□□□□ -2.03
SUB1P3-201ENST00000564581 ZNF831Q5JPB2 1677 aa2.36□□□□□ -2.03
SUB1P3-201ENST00000564581 PTPN13Q12923 2485 aa2.36□□□□□ -2.03
SUB1P3-201ENST00000564581 DOPEY1Q5JWR5 2465 aa2.36□□□□□ -2.03
SUB1P3-201ENST00000564581 SPTBN5Q9NRC6 3674 aaKnown RBP2.36□□□□□ -2.03
SUB1P3-201ENST00000564581 PRRC2BQ5JSZ5 2229 aaKnown RBP2.36□□□□□ -2.03
SUB1P3-201ENST00000564581 SPTAN1Q13813 2472 aaKnown RBP2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 NCOR2Q9Y618 2525 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 FAM208AQ9UK61 1670 aaKnown RBP2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 HELZ2Q9BYK8 2649 aaKnown RBP2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 NRXN2Q9P2S2 1712 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 SNAP23O00161 211 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 ZNF500O60304 480 aaPredicted RBP2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 WDR1O75083 606 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 CRLF1O75462 422 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 CELF2O95319 508 aaKnown RBP2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 MT-CYBP00156 380 aaPredicted RBP2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 TUBBP07437 444 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 MAOAP21397 527 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 METAP2P50579 478 aaKnown RBP eCLIP2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 TUBB4BP68371 445 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 PDCD2Q16342 344 aaPredicted RBP2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 NFIL3Q16649 462 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 TCTN1Q2MV58 587 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 ZNF280DQ6N043 979 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 TRNP1Q6NT89 227 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 DUS1LQ6P1R4 473 aaKnown RBP2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 TMEM81Q6P7N7 255 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 KCTD18Q6PI47 426 aaPredicted RBP2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 CPLX2Q6PUV4 134 aaKnown RBP2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 QSOX2Q6ZRP7 698 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 SMIM5Q71RC9 77 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 TMTC1Q8IUR5 882 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 GPC2Q8N158 579 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 ZNF248Q8NDW4 579 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 PPM1EQ8WY54 764 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 LGALS12Q96DT0 336 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 ST6GAL2Q96JF0 529 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 HINT3Q9NQE9 182 aaKnown RBP2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 C20orf141Q9NUB4 165 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 TTC7AQ9ULT0 858 aaPredicted RBP2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 LOXL2Q9Y4K0 774 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 ASXL3Q9C0F0 2248 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 NSD2O96028 1365 aa2.35□□□□□ -2.03
SUB1P3-201ENST00000564581 DAPK1P53355 1430 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 CACNA1FO60840 1977 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 LAMB1P07942 1786 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 MYO10Q9HD67 2058 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 GCN1Q92616 2671 aaKnown RBP2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 TEX22C9J3V5 150 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 H0YIN7 160 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 NBNO60934 754 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 FTCDO95954 541 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 TFP02787 698 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 TM4SF1P30408 202 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 RFC4P35249 363 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 DCTP40126 519 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 PAPOLAP51003 745 aaKnown RBP2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 HSD17B4P51659 736 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 CDH15P55291 814 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 PMP22Q01453 160 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 PPIGQ13427 754 aaKnown RBP eCLIP2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 NAE1Q13564 534 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 RNPS1Q15287 305 aaKnown RBP2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 ATG16L1Q676U5 607 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 SLC35E4Q6ICL7 350 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 OR7E24Q6IFN5 339 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 ATF7IPQ6VMQ6 1270 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 C15orf39Q6ZRI6 1047 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 NOTCH2NLQ7Z3S9 236 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 PCDH20Q8N6Y1 951 aaKnown RBP2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 ENAHQ8N8S7 591 aaPredicted RBP2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 USP38Q8NB14 1042 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 ACVR1CQ8NER5 493 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 TNIP2Q8NFZ5 429 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 OR52I2Q8NH67 350 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 OR5R1Q8NH85 324 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 MAGEC3Q8TD91 643 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 CCT6BQ92526 530 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 PIGTQ969N2 578 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 ORAI1Q96D31 301 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 GRAMD2BQ96HH9 432 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 NEUROD6Q96NK8 337 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 ZNF599Q96NL3 588 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 PRAM1Q96QH2 718 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 MPHOSPH8Q99549 860 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 UPF2Q9HAU5 1272 aaKnown RBP2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 SEBOXQ9HB31 216 aaPredicted RBP2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 FAM118AQ9NWS6 357 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 ACSL5Q9ULC5 683 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 PADI3Q9ULW8 664 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 DLGAP4Q9Y2H0 992 aa2.34□□□□□ -2.03
SUB1P3-201ENST00000564581 ANKRD31Q8N7Z5 1873 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms