RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 GPR63Q9BZJ6 419 aa13.84□□□□□ -0.19
CDR2-204ENST00000564542 PDE7BQ9NP56 450 aa13.84□□□□□ -0.19
CDR2-204ENST00000564542 SEMA5BQ9P283 1151 aa13.84□□□□□ -0.19
CDR2-204ENST00000564542 CTTNBP2NLQ9P2B4 639 aa13.84□□□□□ -0.19
CDR2-204ENST00000564542 UVRAGQ9P2Y5 699 aa13.84□□□□□ -0.19
CDR2-204ENST00000564542 LCMT1Q9UIC8 334 aa13.84□□□□□ -0.19
CDR2-204ENST00000564542 ZNF487B1APH4 448 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 TIAF1O95411 115 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 PBX1P40424 430 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 HALP42357 657 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 ZBED6P86452 979 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 CDK18Q07002 472 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 TUBB3Q13509 450 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 SEMA5AQ13591 1074 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 PCSK7Q16549 785 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 ZFYVE27Q5T4F4 411 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 C11orf96Q7Z7L8 435 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 TRAPPC5Q8IUR0 188 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 RAPGEF5Q92565 580 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 TADA1Q96BN2 335 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 SLC41A2Q96JW4 573 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 FCRL4Q96PJ5 515 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 RNF157Q96PX1 679 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 SRPK1Q96SB4 655 aaKnown RBP13.83□□□□□ -0.2
CDR2-204ENST00000564542 XPO4Q9C0E2 1151 aaKnown RBP13.83□□□□□ -0.2
CDR2-204ENST00000564542 SLC25A51Q9H1U9 297 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 ACTL8Q9H568 366 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 LRRC4CQ9HCJ2 640 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 TMEM63CQ9P1W3 806 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 RARRES3Q9UL19 164 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 NENFQ9UMX5 172 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 HEY1Q9Y5J3 304 aa13.83□□□□□ -0.2
CDR2-204ENST00000564542 UNC79Q9P2D8 2635 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 DNAJB5O75953 348 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 PDGFAP04085 211 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 FECHP22830 423 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 KDELR1P24390 212 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 UQCRFS1P47985 274 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 PPP1CAP62136 330 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 AP1B1Q10567 949 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 GTF2H3Q13889 308 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 ATP13A5Q4VNC0 1218 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 SLC9A4Q6AI14 798 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 PWWP2BQ6NUJ5 590 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 KLHL35Q6PF15 583 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 BPHLQ86WA6 291 aaPredicted RBP13.82□□□□□ -0.2
CDR2-204ENST00000564542 SIDT2Q8NBJ9 832 aaKnown RBP13.82□□□□□ -0.2
CDR2-204ENST00000564542 THAP4Q8WY91 577 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 IQCDQ96DY2 449 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 AGAP3Q96P47 875 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 OLFM3Q96PB7 478 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 GPR87Q9BY21 358 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 TRIM55Q9BYV6 548 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 CBX8Q9HC52 389 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 TRIM10Q9UDY6 481 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 TMPRSS11EQ9UL52 423 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 CAPN11Q9UMQ6 739 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 WDR37Q9Y2I8 494 aa13.82□□□□□ -0.2
CDR2-204ENST00000564542 IGHV5-51A0A0C4DH38 117 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 LRRD1A4D1F6 860 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 AURKAO14965 403 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 PPP1R12AO14974 1030 aaPredicted RBP13.81□□□□□ -0.2
CDR2-204ENST00000564542 KCNJ13O60928 360 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 VPS4BO75351 444 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 NDST3O95803 873 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 FOLR1P15328 257 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 ACY1Q03154 408 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 DMPKQ09013 629 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 TMEM115Q12893 351 aaPredicted RBP13.81□□□□□ -0.2
CDR2-204ENST00000564542 KCNAB1Q14722 419 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 IQCB1Q15051 598 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 PDK1Q15118 436 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 UGT8Q16880 541 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 C4orf17Q53FE4 359 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 FAM182AQ5T1J6 154 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 CCDC70Q6NSX1 233 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 VSIG1Q86XK7 387 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 KMT5CQ86Y97 462 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 EFCAB3Q8N7B9 438 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 GPR150Q8NGU9 434 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 BRSK1Q8TDC3 778 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.81□□□□□ -0.2
CDR2-204ENST00000564542 CTNNBL1Q8WYA6 563 aaPredicted RBP13.81□□□□□ -0.2
CDR2-204ENST00000564542 ZNF514Q96K75 400 aaPredicted RBP13.81□□□□□ -0.2
CDR2-204ENST00000564542 VPS4AQ9UN37 437 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 SPO11Q9Y5K1 396 aa13.81□□□□□ -0.2
CDR2-204ENST00000564542 SPTBN1Q01082 2364 aaKnown RBP13.81□□□□□ -0.2
CDR2-204ENST00000564542 TTLL8A6PVC2 850 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 APOL1O14791 398 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 MT-CYBP00156 380 aaPredicted RBP13.8□□□□□ -0.2
CDR2-204ENST00000564542 H2AFZP0C0S5 128 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 EBLN1P0CF75 366 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 PTPN4P29074 926 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 HMGCLP35914 325 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 PGDP52209 483 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 LAMB3Q13751 1172 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 ZDHHC20Q5W0Z9 365 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 CAPRIN2Q6IMN6 1127 aaKnown RBP13.8□□□□□ -0.2
CDR2-204ENST00000564542 H2AFVQ71UI9 128 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 SYVN1Q86TM6 617 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms