RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 A4GNTQ9UNA3 340 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 UBE2J1Q9Y385 318 aaPredicted RBP5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 CMAHPQ9Y471 501 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 A0A087WV48 116 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 A0A1B0GWJ7 208 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 A0A1W2PRG0 241 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 CFAP73A6NFT4 308 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 CGB1A6NKQ9 187 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 H0YIV9 168 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 NUDT21O43809 227 aaKnown RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 TRIM13O60858 407 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 DDNO94850 711 aaPredicted RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 OR6B1O95007 311 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ZWINTO95229 277 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 VNN2O95498 520 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 SLC16A8O95907 504 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 PCCBP05166 539 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 RHOP08100 348 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 TPM1P09493 284 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 C8orf89P0DMQ9 161 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 FUT1P19526 365 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 CYP2A7P20853 494 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 GALP22466 123 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 HNRNPA2B1P22626 353 aaKnown RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 HSD17B2P37059 387 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 CDKN1AP38936 164 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 GMPSP49915 693 aaPredicted RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 PTENP60484 403 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ECT2LQ008S8 904 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 RELQ04864 619 aaPredicted RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 RBPJQ06330 500 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 TRAF1Q13077 416 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 DDX39BQ13838 428 aaKnown RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 HADHQ16836 314 aaKnown RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 EPC2Q52LR7 807 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 CXorf66Q5JRM2 361 aaPredicted RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 PRAMEF8Q5VWM4 474 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ANKS6Q68DC2 871 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 GRHL2Q6ISB3 625 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 LAYNQ6UX15 382 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 HAUS6Q7Z4H7 955 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 SYVN1Q86TM6 617 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ZC3H18Q86VM9 953 aaKnown RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 SGMS1Q86VZ5 419 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 RFX6Q8HWS3 928 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 CCDC83Q8IWF9 413 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 CCDC13Q8IYE1 715 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 EIF1ADQ8N9N8 165 aaKnown RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 L3MBTL4Q8NA19 623 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 PLA2G15Q8NCC3 412 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 BBOF1Q8ND07 529 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 SUN5Q8TC36 379 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ALG3Q92685 438 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 EXT2Q93063 718 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 FAR2Q96K12 515 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ZNF396Q96N95 335 aaPredicted RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 CCDC77Q9BR77 488 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 NPLQ9BXD5 320 aaPredicted RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 RTN4RQ9BZR6 473 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 TMEM117Q9H0C3 514 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ADAMTS10Q9H324 1103 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 RNF41Q9H4P4 317 aaPredicted RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 BAIAP2L1Q9UHR4 511 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 MAD2L2Q9UI95 211 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ARFGEF1Q9Y6D6 1849 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ZNF609O15014 1411 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 C2orf92A0A1B0GVN3 265 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 A0A1W2PPM1 405 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 LNP1A1A4G5 178 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 E9PBE3 544 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 E2F3O00716 465 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ZNF213O14771 459 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 TTI1O43156 1089 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 MED24O75448 989 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 NDUFS3O75489 264 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 SLITRK3O94933 977 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 AMHP03971 560 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 LCATP04180 440 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 RLN1P04808 185 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 SERPING1P05155 500 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ENO1P06733 434 aaKnown RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 VIMP08670 466 aaKnown RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ZGLP1P0C6A0 271 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 AREGP15514 252 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 PRPH2P23942 346 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 PTPN4P29074 926 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 CCND2P30279 289 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 PRKAR1BP31321 381 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 CXCR5P32302 372 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 FRKP42685 505 aaPredicted RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 NAGLUP54802 743 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ADORA2A-AS1P86434 159 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 TIAL1Q01085 375 aaKnown RBP eCLIP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 GAD2Q05329 585 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ACSM1Q08AH1 577 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ZBTB17Q13105 803 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 CCNIQ14094 377 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 UBXN2BQ14CS0 331 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 STK11Q15831 433 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms