RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 RBM15BQ8NDT2 890 aaKnown RBP3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 GSDMBQ8TAX9 411 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 TMED6Q8WW62 240 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 LPGAT1Q92604 370 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 RND1Q92730 232 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 VMP1Q96GC9 406 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 SCMH1Q96GD3 660 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 EGLN2Q96KS0 407 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 FER1L6-AS2Q96M78 137 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 NUDCD1Q96RS6 583 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 FNBP1Q96RU3 617 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 KXD1Q9BQD3 176 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 NAA11Q9BSU3 229 aaPredicted RBP3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 SEBOXQ9HB31 216 aaPredicted RBP3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 MTMR10Q9NXD2 777 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 MCM9Q9NXL9 1143 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 COQ3Q9NZJ6 369 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 C1RLQ9NZP8 487 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 MARCH4Q9P2E8 410 aaPredicted RBP3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 ANAPC2Q9UJX6 822 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 ZNF148Q9UQR1 794 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 NFS1Q9Y697 457 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 DDNO94850 711 aaPredicted RBP3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 SLU7O95391 586 aaKnown RBP3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 PPP1R3DO95685 299 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 PENKP01210 267 aaPredicted RBP3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 VDRP11473 427 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 ACTN1P12814 892 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 ACADLP28330 430 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 TNFRSF8P28908 595 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 BDKRB2P30411 391 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 PRCPP42785 496 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 PEX5P50542 639 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 CLCNKAP51800 687 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 GPR143P51810 404 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 CSE1LP55060 971 aaKnown RBP3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 CSNK2A1P68400 391 aaPredicted RBP3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 DDR1Q08345 913 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 DLG1Q12959 904 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 PPP2R5CQ13362 524 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 ALCAMQ13740 583 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 TNIP1Q15025 636 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 SNAPC1Q16533 368 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 CTF1Q16619 201 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 DECR1Q16698 335 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 TCP11X2Q5H9J9 407 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 WDR73Q6P4I2 378 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 TEX38Q6PEX7 206 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 TRAT1Q6PIZ9 186 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 RHBDF2Q6PJF5 856 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 Q6ZTC4 211 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 CREB3L2Q70SY1 520 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 CAMKMTQ7Z624 323 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 IQCHQ86VS3 1027 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 NRROSQ86YC3 692 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 ARID3BQ8IVW6 561 aaPredicted RBP3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 BEST3Q8N1M1 668 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 PCDH20Q8N6Y1 951 aaKnown RBP3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 ZNF713Q8N859 430 aaPredicted RBP3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 TC2NQ8N9U0 490 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 CSNK2A3Q8NEV1 391 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 OR2AK2Q8NG84 335 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 KIF18AQ8NI77 898 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 HM13Q8TCT9 377 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 TRPC4APQ8TEL6 797 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 TAAR8Q969N4 342 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 NXNL1Q96CM4 212 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 MTBPQ96DY7 904 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 GRAMD2BQ96HH9 432 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 CCDC34Q96HJ3 373 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 MED30Q96HR3 178 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 FAM84BQ96KN1 310 aaPredicted RBP3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 OR1F2PQ96R84 312 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 TM6SF1Q9BZW5 370 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 GAREM1Q9H706 876 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 ERVMER34-1Q9H9K5 563 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 OCIAD1Q9NX40 245 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 CHCHD3Q9NX63 227 aaKnown RBP3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 CWC25Q9NXE8 425 aaPredicted RBP3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 HAO2Q9NYQ3 351 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 SMARCAL1Q9NZC9 954 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 ZNF224Q9NZL3 707 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 OR14J1Q9UGF5 321 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 HACL1Q9UJ83 578 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 FBXW11Q9UKB1 542 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 B3GALT5Q9Y2C3 310 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 SNX9Q9Y5X1 595 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 POMT1Q9Y6A1 747 aa3.2□□□□□ -1.9
SHCBP1-202ENST00000563219 ARHGEF40Q8TER5 1519 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 GPR75-ASB3A0A0A6YYF3 556 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 TRAV34A0A0B4J273 112 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 A0A0B4J293 547 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 KANSL1LA0AUZ9 987 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 M0QZ24 198 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 SPINT2O43291 252 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 CLDN14O95500 239 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 PMS2P2O95744 297 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 TRUB2O95900 331 aaKnown RBP3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 HIST1H2ABP04908 130 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms