RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 ZBED6P86452 979 aa16.28■□□□□ 0.2
CMTM3-205ENST00000562707 PCSK7Q16549 785 aa16.28■□□□□ 0.2
CMTM3-205ENST00000562707 KLHL35Q6PF15 583 aa16.28■□□□□ 0.2
CMTM3-205ENST00000562707 BPHLQ86WA6 291 aaPredicted RBP16.28■□□□□ 0.2
CMTM3-205ENST00000562707 TRAPPC5Q8IUR0 188 aa16.28■□□□□ 0.2
CMTM3-205ENST00000562707 LURAP1LQ8IV03 231 aa16.28■□□□□ 0.2
CMTM3-205ENST00000562707 ZNF547Q8IVP9 402 aa16.28■□□□□ 0.2
CMTM3-205ENST00000562707 APLFQ8IW19 511 aaPredicted RBP16.28■□□□□ 0.2
CMTM3-205ENST00000562707 EFCAB3Q8N7B9 438 aa16.28■□□□□ 0.2
CMTM3-205ENST00000562707 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.28■□□□□ 0.2
CMTM3-205ENST00000562707 CT55Q8WUE5 264 aa16.28■□□□□ 0.2
CMTM3-205ENST00000562707 UBXN4Q92575 508 aa16.28■□□□□ 0.2
CMTM3-205ENST00000562707 IMP4Q96G21 291 aaKnown RBP16.28■□□□□ 0.2
CMTM3-205ENST00000562707 AGAP3Q96P47 875 aa16.28■□□□□ 0.2
CMTM3-205ENST00000562707 FCRL4Q96PJ5 515 aa16.28■□□□□ 0.2
CMTM3-205ENST00000562707 SLC25A51Q9H1U9 297 aa16.28■□□□□ 0.2
CMTM3-205ENST00000562707 CBX8Q9HC52 389 aa16.28■□□□□ 0.2
CMTM3-205ENST00000562707 UVRAGQ9P2Y5 699 aa16.28■□□□□ 0.2
CMTM3-205ENST00000562707 TTLL8A6PVC2 850 aa16.27■□□□□ 0.2
CMTM3-205ENST00000562707 H2AFZP0C0S5 128 aa16.27■□□□□ 0.2
CMTM3-205ENST00000562707 ARL4DP49703 201 aa16.27■□□□□ 0.2
CMTM3-205ENST00000562707 TPM4P67936 248 aa16.27■□□□□ 0.2
CMTM3-205ENST00000562707 ACY1Q03154 408 aa16.27■□□□□ 0.2
CMTM3-205ENST00000562707 TMEM115Q12893 351 aaPredicted RBP16.27■□□□□ 0.2
CMTM3-205ENST00000562707 TUBB3Q13509 450 aa16.27■□□□□ 0.2
CMTM3-205ENST00000562707 PDK1Q15118 436 aa16.27■□□□□ 0.2
CMTM3-205ENST00000562707 H2AFVQ71UI9 128 aa16.27■□□□□ 0.2
CMTM3-205ENST00000562707 BRSK1Q8TDC3 778 aa16.27■□□□□ 0.2
CMTM3-205ENST00000562707 CTNNBL1Q8WYA6 563 aaPredicted RBP16.27■□□□□ 0.2
CMTM3-205ENST00000562707 RAPGEF5Q92565 580 aa16.27■□□□□ 0.2
CMTM3-205ENST00000562707 IQCDQ96DY2 449 aa16.27■□□□□ 0.2
CMTM3-205ENST00000562707 VPS35Q96QK1 796 aa16.27■□□□□ 0.2
CMTM3-205ENST00000562707 MAK16Q9BXY0 300 aaKnown RBP16.27■□□□□ 0.2
CMTM3-205ENST00000562707 GPR87Q9BY21 358 aa16.27■□□□□ 0.2
CMTM3-205ENST00000562707 CEP41Q9BYV8 373 aa16.27■□□□□ 0.2
CMTM3-205ENST00000562707 TMEM63CQ9P1W3 806 aa16.27■□□□□ 0.2
CMTM3-205ENST00000562707 CAPN11Q9UMQ6 739 aa16.27■□□□□ 0.2
CMTM3-205ENST00000562707 LUC7L2Q9Y383 392 aaKnown RBP16.27■□□□□ 0.2
CMTM3-205ENST00000562707 FLNCQ14315 2725 aa16.27■□□□□ 0.19
CMTM3-205ENST00000562707 LRRD1A4D1F6 860 aa16.26■□□□□ 0.19
CMTM3-205ENST00000562707 NDST3O95803 873 aa16.26■□□□□ 0.19
CMTM3-205ENST00000562707 ANP32AP39687 249 aaKnown RBP16.26■□□□□ 0.19
CMTM3-205ENST00000562707 RPS15P62841 145 aaKnown RBP16.26■□□□□ 0.19
CMTM3-205ENST00000562707 PDE1BQ01064 536 aa16.26■□□□□ 0.19
CMTM3-205ENST00000562707 SEMA5AQ13591 1074 aa16.26■□□□□ 0.19
CMTM3-205ENST00000562707 KHDC1Q4VXA5 237 aaKnown RBP16.26■□□□□ 0.19
CMTM3-205ENST00000562707 THAP4Q8WY91 577 aa16.26■□□□□ 0.19
CMTM3-205ENST00000562707 SLC41A2Q96JW4 573 aa16.26■□□□□ 0.19
CMTM3-205ENST00000562707 BRD8Q9H0E9 1235 aa16.26■□□□□ 0.19
CMTM3-205ENST00000562707 ACTL8Q9H568 366 aa16.26■□□□□ 0.19
CMTM3-205ENST00000562707 BPIFA1Q9NP55 256 aa16.26■□□□□ 0.19
CMTM3-205ENST00000562707 DOPEY2Q9Y3R5 2298 aa16.26■□□□□ 0.19
CMTM3-205ENST00000562707 IGHV5-51A0A0C4DH38 117 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 APOL1O14791 398 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 PPP1R12AO14974 1030 aaPredicted RBP16.25■□□□□ 0.19
CMTM3-205ENST00000562707 AGFG2O95081 481 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 TIAF1O95411 115 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 FOLR1P15328 257 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 ZFXP17010 805 aaPredicted RBP16.25■□□□□ 0.19
CMTM3-205ENST00000562707 FECHP22830 423 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 FANCCQ00597 558 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 SLC14A2Q15849 920 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 UGT8Q16880 541 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 ATP13A5Q4VNC0 1218 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 FAM182AQ5T1J6 154 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 PWWP2BQ6NUJ5 590 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 C11orf96Q7Z7L8 435 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 AMZ2Q86W34 360 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 KMT5CQ86Y97 462 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 PLD5Q8N7P1 536 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 GALNT11Q8NCW6 608 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 TADA1Q96BN2 335 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 ZCCHC2Q9C0B9 1178 aaKnown RBP16.25■□□□□ 0.19
CMTM3-205ENST00000562707 SEMA5BQ9P283 1151 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 TMPRSS11EQ9UL52 423 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 WDR37Q9Y2I8 494 aa16.25■□□□□ 0.19
CMTM3-205ENST00000562707 UBA6A0AVT1 1052 aaPredicted RBP16.24■□□□□ 0.19
CMTM3-205ENST00000562707 ZNF487B1APH4 448 aa16.24■□□□□ 0.19
CMTM3-205ENST00000562707 PMPCBO75439 489 aa16.24■□□□□ 0.19
CMTM3-205ENST00000562707 POP7O75817 140 aaKnown RBP16.24■□□□□ 0.19
CMTM3-205ENST00000562707 DNAJB5O75953 348 aa16.24■□□□□ 0.19
CMTM3-205ENST00000562707 MT-CYBP00156 380 aaPredicted RBP16.24■□□□□ 0.19
CMTM3-205ENST00000562707 PDGFAP04085 211 aa16.24■□□□□ 0.19
CMTM3-205ENST00000562707 PTPN4P29074 926 aa16.24■□□□□ 0.19
CMTM3-205ENST00000562707 TNNT3P45378 269 aaPredicted RBP16.24■□□□□ 0.19
CMTM3-205ENST00000562707 PGDP52209 483 aa16.24■□□□□ 0.19
CMTM3-205ENST00000562707 UBASH3AP57075 661 aa16.24■□□□□ 0.19
CMTM3-205ENST00000562707 MESDQ14696 234 aa16.24■□□□□ 0.19
CMTM3-205ENST00000562707 KCNAB1Q14722 419 aa16.24■□□□□ 0.19
CMTM3-205ENST00000562707 IQCB1Q15051 598 aa16.24■□□□□ 0.19
CMTM3-205ENST00000562707 PLCL1Q15111 1095 aa16.24■□□□□ 0.19
CMTM3-205ENST00000562707 FHL5Q5TD97 284 aa16.24■□□□□ 0.19
CMTM3-205ENST00000562707 ZDHHC20Q5W0Z9 365 aa16.24■□□□□ 0.19
CMTM3-205ENST00000562707 SYVN1Q86TM6 617 aa16.24■□□□□ 0.19
CMTM3-205ENST00000562707 SPATA22Q8NHS9 363 aa16.24■□□□□ 0.19
CMTM3-205ENST00000562707 CPT1CQ8TCG5 803 aa16.24■□□□□ 0.19
CMTM3-205ENST00000562707 ZNF514Q96K75 400 aaPredicted RBP16.24■□□□□ 0.19
CMTM3-205ENST00000562707 CD180Q99467 661 aa16.24■□□□□ 0.19
CMTM3-205ENST00000562707 SLC25A23Q9BV35 468 aa16.24■□□□□ 0.19
CMTM3-205ENST00000562707 TRIM55Q9BYV6 548 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms