RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 RPS21P63220 83 aaKnown RBP14.1□□□□□ -0.15
CNN2-204ENST00000562075 BST1Q10588 318 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 UBXN2BQ14CS0 331 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 CRY1Q16526 586 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 KHDC1Q4VXA5 237 aaKnown RBP14.1□□□□□ -0.15
CNN2-204ENST00000562075 ZNF648Q5T619 568 aaPredicted RBP14.1□□□□□ -0.15
CNN2-204ENST00000562075 SEL1L3Q68CR1 1132 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 KIAA1161Q6NSJ0 714 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 OTOAQ7RTW8 1153 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 ISCA2Q86U28 154 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 FAM124AQ86V42 546 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 PELI3Q8N2H9 469 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 SYNPOQ8N3V7 929 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 EEF1AKMT1Q8WVE0 214 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 EXT2Q93063 718 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 KIAA1191Q96A73 305 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 PTERQ96BW5 349 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 GRAMD1AQ96CP6 724 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 CCDC126Q96EE4 140 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 SHDQ96IW2 340 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 ELAC2Q9BQ52 826 aaKnown RBP14.1□□□□□ -0.15
CNN2-204ENST00000562075 LMAN1LQ9HAT1 526 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 PREBQ9HCU5 417 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 POLMQ9NP87 494 aaPredicted RBP14.1□□□□□ -0.15
CNN2-204ENST00000562075 OXSMQ9NWU1 459 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 KLHL42Q9P2K6 505 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 THEGQ9P2T0 379 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 WNT16Q9UBV4 365 aa14.1□□□□□ -0.15
CNN2-204ENST00000562075 ZFR2Q9UPR6 939 aaKnown RBP14.1□□□□□ -0.15
CNN2-204ENST00000562075 A0A1W2PQU0 124 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 NPEPPSL1A6NEC2 478 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 TSPAN12O95859 305 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 FTH1P02794 183 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 GABRG2P18507 467 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 SGCGQ13326 291 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 GTF2H3Q13889 308 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 AGERQ15109 404 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 OR4D1Q15615 310 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 GKAP1Q5VSY0 366 aaPredicted RBP14.09□□□□□ -0.15
CNN2-204ENST00000562075 LIPMQ5VYY2 423 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 ADAMTSL4Q6UY14 1074 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 TRIM74Q86UV6 250 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 MYO1HQ8N1T3 1032 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 FLCNQ8NFG4 579 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 RHEBL1Q8TAI7 183 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 STAG3L4Q8TBR4 150 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 HMGB4Q8WW32 186 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 C1QTNF7Q9BXJ2 289 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 OSBPL6Q9BZF3 934 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 LTB4R2Q9NPC1 389 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 LATS2Q9NRM7 1088 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 TSR3Q9UJK0 312 aaKnown RBP14.09□□□□□ -0.15
CNN2-204ENST00000562075 CNOT6Q9ULM6 557 aaKnown RBP14.09□□□□□ -0.15
CNN2-204ENST00000562075 RNF112Q9ULX5 631 aa14.09□□□□□ -0.15
CNN2-204ENST00000562075 TBC1D3DA0A087WVF3 549 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 TBC1D3IA0A087WXS9 549 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 TBC1D3EA0A087X179 549 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 TBC1D3KA0A087X1G2 549 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 CCDC189A1A4V9 331 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 KRBA1A5PL33 1030 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 TBC1D3FA6NER0 549 aaPredicted RBP14.08□□□□□ -0.16
CNN2-204ENST00000562075 OR2AG2A6NM03 316 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 A8MT66 165 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 TMEM114B3SHH9 223 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 CHURC1-FNTBB4DL54 471 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 SUPT3HB4E1H0 165 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 TBC1D3LB9A6J9 549 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 CDC7O00311 574 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 KPNA5O15131 536 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 KERAO60938 352 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 ATG13O75143 517 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 SNNO75324 88 aaPredicted RBP14.08□□□□□ -0.16
CNN2-204ENST00000562075 SUPT3HO75486 399 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 TBC1D3HP0C7X1 549 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 CBSLP0DN79 551 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 TROVE2P10155 538 aaKnown RBP eCLIP14.08□□□□□ -0.16
CNN2-204ENST00000562075 C7P10643 843 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 CBSP35520 551 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 SLC1A6P48664 564 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 DGKEP52429 567 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 OCRLQ01968 901 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 SF3A3Q12874 501 aaKnown RBP eCLIP14.08□□□□□ -0.16
CNN2-204ENST00000562075 TMEM115Q12893 351 aaPredicted RBP14.08□□□□□ -0.16
CNN2-204ENST00000562075 IRF4Q15306 451 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 TSNQ15631 228 aaKnown RBP14.08□□□□□ -0.16
CNN2-204ENST00000562075 WSCD2Q2TBF2 565 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 TMEM259Q4ZIN3 620 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 ACSBG2Q5FVE4 666 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 CES4AQ5XG92 561 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 TBC1D3GQ6DHY5 549 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 TBC1D3CQ6IPX1 549 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 PNCKQ6P2M8 343 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 PIWIL4Q7Z3Z4 852 aaKnown RBP14.08□□□□□ -0.16
CNN2-204ENST00000562075 SPATA21Q7Z572 469 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 HORMAD1Q86X24 394 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 SLC22A9Q8IVM8 553 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 TBC1D3Q8IZP1 549 aaPredicted RBP14.08□□□□□ -0.16
CNN2-204ENST00000562075 ZNF687Q8N1G0 1237 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 PGBD3Q8N328 593 aa14.08□□□□□ -0.16
CNN2-204ENST00000562075 RASGEF1AQ8N9B8 481 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms