RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 ZNF830Q96NB3 372 aaPredicted RBP11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 RNF157Q96PX1 679 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 VPS35Q96QK1 796 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 SRPK1Q96SB4 655 aaKnown RBP11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 GPR87Q9BY21 358 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 TWSG1Q9GZX9 223 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 BRD8Q9H0E9 1235 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 LRRC4CQ9HCJ2 640 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 PDE7BQ9NP56 450 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 LCMT1Q9UIC8 334 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 SHOC2Q9UQ13 582 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 ZNF711Q9Y462 761 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 LRRK2Q5S007 2527 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 RELNP78509 3460 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 OR52A4PA6NMU1 304 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 ZNF487B1APH4 448 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 SERPINC1P01008 464 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 BPIP17213 487 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 VCLP18206 1134 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 KDELR1P24390 212 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 MSNP26038 577 aaKnown RBP11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 CASP14P31944 242 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 ZBED6P86452 979 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 CDK18Q07002 472 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 PLA2G4EQ3MJ16 856 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 KHDC1Q4VXA5 237 aaKnown RBP11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 C4orf17Q53FE4 359 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 IRGCQ6NXR0 463 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 FAM92BQ6ZTR7 304 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 C11orf96Q7Z7L8 435 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 NT5DC3Q86UY8 548 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 CPNE8Q86YQ8 564 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 DTX3LQ8TDB6 740 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 CT55Q8WUE5 264 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 THAP4Q8WY91 577 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 RNF31Q96EP0 1072 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 SLC41A2Q96JW4 573 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 GPR63Q9BZJ6 419 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 SLC25A51Q9H1U9 297 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 UVRAGQ9P2Y5 699 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 RARRES3Q9UL19 164 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 TMPRSS11EQ9UL52 423 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 NENFQ9UMX5 172 aa11.61□□□□□ -0.55
CARMIL3-204ENST00000561354 VPS4BO75351 444 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 MTX2O75431 263 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 TIAF1O95411 115 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 PDGFAP04085 211 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 PIRTP0C851 137 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 FECHP22830 423 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 CDC25BP30305 580 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 PBX1P40424 430 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 HALP42357 657 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 DRG2P55039 364 aaKnown RBP11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 DMPKQ09013 629 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 TMEM115Q12893 351 aaPredicted RBP11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 IQCB1Q15051 598 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 UGT8Q16880 541 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 SLC9A4Q6AI14 798 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 CCDC70Q6NSX1 233 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 PWWP2BQ6NUJ5 590 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 KLHL35Q6PF15 583 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 LUZP1Q86V48 1076 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 VSIG1Q86XK7 387 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 KMT5CQ86Y97 462 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 PLD5Q8N7P1 536 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 SIDT2Q8NBJ9 832 aaKnown RBP11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 GALNT11Q8NCW6 608 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 BRSK1Q8TDC3 778 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 RAPGEF5Q92565 580 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 IQCDQ96DY2 449 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 ACTL8Q9H568 366 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 MLXIPLQ9NP71 852 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 CTTNBP2NLQ9P2B4 639 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 CAPN11Q9UMQ6 739 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 VPS4AQ9UN37 437 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 WDR37Q9Y2I8 494 aa11.6□□□□□ -0.55
CARMIL3-204ENST00000561354 IGHV5-51A0A0C4DH38 117 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 TTLL8A6PVC2 850 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 DNAJB5O75953 348 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 NDST3O95803 873 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 SLC4A1P02730 911 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 H2AFZP0C0S5 128 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 FOLR1P15328 257 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 PTPN4P29074 926 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 HMGCLP35914 325 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 ACY1Q03154 408 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 AP1B1Q10567 949 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 TUBB3Q13509 450 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 GTF2H3Q13889 308 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 PDK1Q15118 436 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 PCSK7Q16549 785 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 ATP13A5Q4VNC0 1218 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 ZFYVE27Q5T4F4 411 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 CAPRIN2Q6IMN6 1127 aaKnown RBP11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 H2AFVQ71UI9 128 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 SYVN1Q86TM6 617 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 AMZ2Q86W34 360 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 TRAPPC5Q8IUR0 188 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 EFCAB3Q8N7B9 438 aa11.59□□□□□ -0.55
CARMIL3-204ENST00000561354 TTC25Q96NG3 672 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms