RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 CD63P08962 238 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 DNAJA1P31689 397 aaKnown RBP9.33□□□□□ -0.92
HERC1-210ENST00000560897 GABRB2P47870 512 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 CLCNKAP51800 687 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 IST1P53990 364 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 SOX8P57073 446 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 PPP1CAP62136 330 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 CSNK1G2P78368 415 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 FOLH1Q04609 750 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 FOXD4Q12950 439 aaPredicted RBP9.33□□□□□ -0.92
HERC1-210ENST00000560897 STIM1Q13586 685 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 C15orf59Q2T9L4 293 aaPredicted RBP9.33□□□□□ -0.92
HERC1-210ENST00000560897 PTCHD3Q3KNS1 767 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 TDRD12Q587J7 1177 aaKnown RBP9.33□□□□□ -0.92
HERC1-210ENST00000560897 MLIPQ5VWP3 458 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 LRRC66Q68CR7 880 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 CERS6Q6ZMG9 384 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 SPOCD1Q6ZMY3 1216 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 TECPR1Q7Z6L1 1165 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 SLFN11Q7Z7L1 901 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 TSPAN33Q86UF1 283 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 CCDC185Q8N715 623 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 EMC1Q8N766 993 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 ZNF501Q96CX3 271 aaPredicted RBP9.33□□□□□ -0.92
HERC1-210ENST00000560897 SCRN2Q96FV2 425 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 RIOK2Q9BVS4 552 aaKnown RBP9.33□□□□□ -0.92
HERC1-210ENST00000560897 CARD9Q9H257 536 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 GPAMQ9HCL2 828 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 SCHIP1Q9P0W5 487 aaPredicted RBP9.33□□□□□ -0.92
HERC1-210ENST00000560897 ZNF624Q9P2J8 865 aaPredicted RBP9.33□□□□□ -0.92
HERC1-210ENST00000560897 SEC14L3Q9UDX4 400 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 PTRH2Q9Y3E5 179 aaKnown RBP9.33□□□□□ -0.92
HERC1-210ENST00000560897 PCDHGC4Q9Y5F7 938 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 PCYT1BQ9Y5K3 369 aaPredicted RBP9.33□□□□□ -0.92
HERC1-210ENST00000560897 NCOA6Q14686 2063 aaPredicted RBP9.32□□□□□ -0.92
HERC1-210ENST00000560897 DOCK10Q96BY6 2186 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 FAM170AA1A519 330 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 MAP3K7O43318 606 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 HTRA2O43464 458 aaPredicted RBP9.32□□□□□ -0.92
HERC1-210ENST00000560897 NUAK1O60285 661 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 F13A1P00488 732 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 HBQ1P09105 142 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 ZNF30P17039 623 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 CTPS1P17812 591 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 TNFAIP3P21580 790 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 CMA1P23946 247 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 RORAP35398 523 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 TDGF1P3P51864 188 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 PMS1P54277 932 aaKnown RBP9.32□□□□□ -0.92
HERC1-210ENST00000560897 ADORA2A-AS1P86434 159 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 DSG2Q14126 1118 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 INAQ16352 499 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 PLA2G4EQ3MJ16 856 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 ARMC12Q5T9G4 340 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 PRAMEF17Q5VTA0 474 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 ATL3Q6DD88 541 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 TRNP1Q6NT89 227 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 ARMC6Q6NXE6 501 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 RPUSD3Q6P087 351 aaKnown RBP9.32□□□□□ -0.92
HERC1-210ENST00000560897 Q71RC1 249 aaPredicted RBP9.32□□□□□ -0.92
HERC1-210ENST00000560897 ARCQ7LC44 396 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 STRADAQ7RTN6 431 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 NLRP8Q86W28 1048 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 EPS8L1Q8TE68 723 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 NINJ1Q92982 152 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 NTAN1Q96AB6 310 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 CELF6Q96J87 481 aaKnown RBP9.32□□□□□ -0.92
HERC1-210ENST00000560897 AGAP2Q99490 1192 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 MAGEB5Q9BZ81 275 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 CXXC4Q9H2H0 198 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 SLC40A1Q9NP59 571 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 PCMTD2Q9NV79 361 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 NDOR1Q9UHB4 597 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 TMEM59LQ9UK28 342 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 BTRCQ9Y297 605 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 DNAJC16Q9Y2G8 782 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.32□□□□□ -0.92
HERC1-210ENST00000560897 PCM1Q15154 2024 aa9.32□□□□□ -0.92
HERC1-210ENST00000560897 CCDC88CQ9P219 2028 aa9.31□□□□□ -0.92
HERC1-210ENST00000560897 OR52A4PA6NMU1 304 aa9.31□□□□□ -0.92
HERC1-210ENST00000560897 TMEM150CB9EJG8 249 aa9.31□□□□□ -0.92
HERC1-210ENST00000560897 GOLGA6L22H0YM25 854 aa9.31□□□□□ -0.92
HERC1-210ENST00000560897 DFFAO00273 331 aa9.31□□□□□ -0.92
HERC1-210ENST00000560897 PSMA7O14818 248 aa9.31□□□□□ -0.92
HERC1-210ENST00000560897 CAPN1P07384 714 aa9.31□□□□□ -0.92
HERC1-210ENST00000560897 RPL10P27635 214 aaKnown RBP9.31□□□□□ -0.92
HERC1-210ENST00000560897 HSPA9P38646 679 aaKnown RBP9.31□□□□□ -0.92
HERC1-210ENST00000560897 HALP42357 657 aa9.31□□□□□ -0.92
HERC1-210ENST00000560897 PAPOLAP51003 745 aaKnown RBP9.31□□□□□ -0.92
HERC1-210ENST00000560897 BPIFB4P59827 614 aa9.31□□□□□ -0.92
HERC1-210ENST00000560897 TPI1P60174 286 aa9.31□□□□□ -0.92
HERC1-210ENST00000560897 KRT85P78386 507 aa9.31□□□□□ -0.92
HERC1-210ENST00000560897 ARG2P78540 354 aa9.31□□□□□ -0.92
HERC1-210ENST00000560897 RAB6CQ53S08 254 aa9.31□□□□□ -0.92
HERC1-210ENST00000560897 C2CD6Q53TS8 623 aa9.31□□□□□ -0.92
HERC1-210ENST00000560897 ZNF658Q5TYW1 1059 aaPredicted RBP9.31□□□□□ -0.92
HERC1-210ENST00000560897 GJB7Q6PEY0 223 aa9.31□□□□□ -0.92
HERC1-210ENST00000560897 CRTC3Q6UUV7 619 aa9.31□□□□□ -0.92
HERC1-210ENST00000560897 IGFL2Q6UWQ7 119 aa9.31□□□□□ -0.92
HERC1-210ENST00000560897 RFLNAQ6ZTI6 216 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms