RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 FAAH2Q6GMR7 532 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 GPALPP1Q8IXQ4 340 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 GPR21Q99679 349 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 RNF208Q9H0X6 261 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 SDCBP2Q9H190 292 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 ST6GALNAC4Q9H4F1 302 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 CHRAC1Q9NRG0 131 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 TCAF1Q9Y4C2 921 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 RAI2Q9Y5P3 530 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 B4GALT5O43286 388 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 SEMA3DO95025 777 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 PGRP06401 933 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 IDSP22304 550 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 L1CAMP32004 1257 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 RPIAP49247 311 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 NDUFA9Q16795 377 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 ARSHQ5FYA8 562 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 ARMCX6Q7L4S7 300 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 DNAJB7Q7Z6W7 309 aaPredicted RBP13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 PHYKPLQ8IUZ5 450 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 PIGXQ8TBF5 258 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 GATA5Q9BWX5 397 aaPredicted RBP13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 BHLHE41Q9C0J9 482 aaPredicted RBP13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 IMP3Q9NV31 184 aaKnown RBP13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 GMIPQ9P107 970 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 BAIAP2Q9UQB8 552 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 SMIM35A0A1B0GVV1 85 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 TFPIP10646 304 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 ECT2LQ008S8 904 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 EML3Q32P44 896 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 RUNDC3AQ59EK9 446 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 DRICH1Q6PGQ1 229 aaPredicted RBP13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 MAF1Q9H063 256 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 CNOT6Q9ULM6 557 aaKnown RBP13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 KIDINS220Q9ULH0 1771 aa13.08□□□□□ -0.31
CSPG4P11-201ENST00000560634 RBMXL2O75526 392 aaKnown RBP13.08□□□□□ -0.31
CSPG4P11-201ENST00000560634 PBX3P40426 434 aa13.08□□□□□ -0.31
CSPG4P11-201ENST00000560634 CBFBQ13951 182 aa13.08□□□□□ -0.31
CSPG4P11-201ENST00000560634 POM121L1PQ3SYA9 428 aa13.08□□□□□ -0.31
CSPG4P11-201ENST00000560634 REP15Q6BDI9 236 aa13.08□□□□□ -0.31
CSPG4P11-201ENST00000560634 MED27Q6P2C8 311 aa13.08□□□□□ -0.31
CSPG4P11-201ENST00000560634 ULK3Q6PHR2 472 aa13.08□□□□□ -0.31
CSPG4P11-201ENST00000560634 RHBDF2Q6PJF5 856 aa13.08□□□□□ -0.31
CSPG4P11-201ENST00000560634 SAMD14Q8IZD0 417 aaPredicted RBP13.08□□□□□ -0.31
CSPG4P11-201ENST00000560634 SPOCK2Q92563 424 aa13.08□□□□□ -0.31
CSPG4P11-201ENST00000560634 GLIS2Q9BZE0 524 aaPredicted RBP13.08□□□□□ -0.31
CSPG4P11-201ENST00000560634 TIMM22Q9Y584 194 aa13.08□□□□□ -0.31
CSPG4P11-201ENST00000560634 DNTTP04053 509 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 RPL19P84098 196 aaKnown RBP13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 SRSF11Q05519 484 aaKnown RBP13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 MAP2K5Q13163 448 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 NAE1Q13564 534 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 SF1Q15637 639 aaKnown RBP13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 DPY19L1Q2PZI1 675 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 ZNF311Q5JNZ3 666 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 MON1BQ7L1V2 547 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 OR10G6Q8NH81 332 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 TLCD1Q96CP7 247 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 CRELD1Q96HD1 420 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 CITED4Q96RK1 184 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 TTPALQ9BTX7 342 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 TNKS2Q9H2K2 1166 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 CIDEBQ9UHD4 219 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 DIP2AQ14689 1571 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 MFSD11O43934 449 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 CCNB2O95067 398 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 CD247P20963 164 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 TMEM192Q8IY95 271 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 TMEM199Q8N511 208 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 UBR7Q8N806 425 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 LRRN4Q8WUT4 740 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 EFHD2Q96C19 240 aaPredicted RBP13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 IGFLR1Q9H665 355 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 CNTN6Q9UQ52 1028 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 CEP170BQ9Y4F5 1589 aaPredicted RBP13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 SCGNO76038 276 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 COL6A1P12109 1028 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 MAGP20916 626 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 CD52P31358 61 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 CD320Q9NPF0 282 aa13.08□□□□□ -0.32
CSPG4P11-201ENST00000560634 ADM5C9JUS6 153 aa13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 E7ENX8 843 aa13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 SCAMP3O14828 347 aaKnown RBP13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 NOS1APO75052 506 aaPredicted RBP13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 EIF5AP63241 154 aaKnown RBP13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 TAF10Q12962 218 aa13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 CA9Q16790 459 aa13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 FRMD7Q6ZUT3 714 aa13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 OR8H1Q8NGG4 311 aa13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 TBATAQ96M53 351 aa13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 CST11Q9H112 138 aa13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 DNAJB4Q9UDY4 337 aa13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 PCDHGA10Q9Y5H3 936 aa13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 DGKBQ9Y6T7 804 aa13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 DPPA5A6NC42 116 aa13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 PIK3C2BO00750 1634 aa13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 SLC7A4O43246 635 aa13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 ESR1P03372 595 aa13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 CNTNAP1P78357 1384 aa13.07□□□□□ -0.32
CSPG4P11-201ENST00000560634 PRR5P85299 388 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms