RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 GTF2H3Q13889 308 aa11.83□□□□□ -0.52
MARK3-221ENST00000560603 GPR18Q14330 331 aa11.83□□□□□ -0.52
MARK3-221ENST00000560603 PDK2Q15119 407 aa11.83□□□□□ -0.52
MARK3-221ENST00000560603 CHRNA6Q15825 494 aa11.83□□□□□ -0.52
MARK3-221ENST00000560603 ZNF648Q5T619 568 aaPredicted RBP11.83□□□□□ -0.52
MARK3-221ENST00000560603 KCTD6Q8NC69 237 aa11.83□□□□□ -0.52
MARK3-221ENST00000560603 FAM71BQ8TC56 605 aa11.83□□□□□ -0.52
MARK3-221ENST00000560603 SLC41A2Q96JW4 573 aa11.83□□□□□ -0.52
MARK3-221ENST00000560603 SRPK1Q96SB4 655 aaKnown RBP11.83□□□□□ -0.52
MARK3-221ENST00000560603 CD180Q99467 661 aa11.83□□□□□ -0.52
MARK3-221ENST00000560603 ZNF670Q9BS34 389 aa11.83□□□□□ -0.52
MARK3-221ENST00000560603 NUP85Q9BW27 656 aa11.83□□□□□ -0.52
MARK3-221ENST00000560603 TRIM55Q9BYV6 548 aa11.83□□□□□ -0.52
MARK3-221ENST00000560603 GPR63Q9BZJ6 419 aa11.83□□□□□ -0.52
MARK3-221ENST00000560603 XPO4Q9C0E2 1151 aaKnown RBP11.83□□□□□ -0.52
MARK3-221ENST00000560603 ING2Q9H160 280 aa11.83□□□□□ -0.52
MARK3-221ENST00000560603 MAGEE1Q9HCI5 957 aa11.83□□□□□ -0.52
MARK3-221ENST00000560603 SEMA5BQ9P283 1151 aa11.83□□□□□ -0.52
MARK3-221ENST00000560603 FARSAQ9Y285 508 aaKnown RBP11.83□□□□□ -0.52
MARK3-221ENST00000560603 ZNF106Q9H2Y7 1883 aaKnown RBP11.83□□□□□ -0.52
MARK3-221ENST00000560603 OR52A4PA6NMU1 304 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 DPM1O60762 260 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 JCHAINP01591 159 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 CD48P09326 243 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 DPYSL3Q14195 570 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 GALNT3Q14435 633 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 CCDC70Q6NSX1 233 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 PWWP2BQ6NUJ5 590 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 TRAPPC5Q8IUR0 188 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 GPR26Q8NDV2 337 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 OR8K5Q8NH50 307 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 BRSK1Q8TDC3 778 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 HDAC11Q96DB2 347 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 ZNF514Q96K75 400 aaPredicted RBP11.82□□□□□ -0.52
MARK3-221ENST00000560603 BTBD6Q96KE9 485 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 TTC25Q96NG3 672 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 NAT10Q9H0A0 1025 aaKnown RBP11.82□□□□□ -0.52
MARK3-221ENST00000560603 MLXIPLQ9NP71 852 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 SLAMF7Q9NQ25 335 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 FGF21Q9NSA1 209 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 SHOC2Q9UQ13 582 aa11.82□□□□□ -0.52
MARK3-221ENST00000560603 BZW2Q9Y6E2 419 aaKnown RBP11.82□□□□□ -0.52
MARK3-221ENST00000560603 MED13Q9UHV7 2174 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 IGHV5-51A0A0C4DH38 117 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 UBA6A0AVT1 1052 aaPredicted RBP11.81□□□□□ -0.52
MARK3-221ENST00000560603 ARGFXA6NJG6 315 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 CPNE3O75131 537 aaKnown RBP11.81□□□□□ -0.52
MARK3-221ENST00000560603 SORBS2O94875 1100 aaKnown RBP11.81□□□□□ -0.52
MARK3-221ENST00000560603 TIAF1O95411 115 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 SLC4A1P02730 911 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 KLK3P07288 261 aaPredicted RBP11.81□□□□□ -0.52
MARK3-221ENST00000560603 MMP2P08253 660 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 SKILP12757 684 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 BRAFP15056 766 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 FOLR1P15328 257 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 FECHP22830 423 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 ARSEP51690 589 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 DRG2P55039 364 aaKnown RBP11.81□□□□□ -0.52
MARK3-221ENST00000560603 HSD11B2P80365 405 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 PLCL1Q15111 1095 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 INPP5JQ15735 1006 aaPredicted RBP11.81□□□□□ -0.52
MARK3-221ENST00000560603 NADK2Q4G0N4 442 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 TMTC4Q5T4D3 741 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 ZFYVE27Q5T4F4 411 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 PAPD7Q5XG87 772 aaKnown RBP11.81□□□□□ -0.52
MARK3-221ENST00000560603 CPZQ66K79 652 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 E4F1Q66K89 784 aaPredicted RBP11.81□□□□□ -0.52
MARK3-221ENST00000560603 TMC3Q7Z5M5 1100 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 GDAP1Q8TB36 358 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 MR1Q95460 341 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 VPS35Q96QK1 796 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 ZCCHC2Q9C0B9 1178 aaKnown RBP11.81□□□□□ -0.52
MARK3-221ENST00000560603 THAP2Q9H0W7 228 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 CASS4Q9NQ75 786 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 TMEM63CQ9P1W3 806 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 MAP10Q9P2G4 905 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 TRIM10Q9UDY6 481 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 ZNF711Q9Y462 761 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 SHANK1Q9Y566 2161 aa11.81□□□□□ -0.52
MARK3-221ENST00000560603 TNRC6AQ8NDV7 1962 aaKnown RBP11.8□□□□□ -0.52
MARK3-221ENST00000560603 TLCD2A6NGC4 264 aa11.8□□□□□ -0.52
MARK3-221ENST00000560603 KCNK1O00180 336 aa11.8□□□□□ -0.52
MARK3-221ENST00000560603 SEMA7AO75326 666 aa11.8□□□□□ -0.52
MARK3-221ENST00000560603 MTX2O75431 263 aa11.8□□□□□ -0.52
MARK3-221ENST00000560603 SCRG1O75711 98 aa11.8□□□□□ -0.52
MARK3-221ENST00000560603 CYP1A2P05177 515 aa11.8□□□□□ -0.52
MARK3-221ENST00000560603 PIRTP0C851 137 aa11.8□□□□□ -0.52
MARK3-221ENST00000560603 LPOP22079 712 aaPredicted RBP11.8□□□□□ -0.52
MARK3-221ENST00000560603 GJC1P36383 396 aa11.8□□□□□ -0.52
MARK3-221ENST00000560603 GSDMDP57764 484 aa11.8□□□□□ -0.52
MARK3-221ENST00000560603 RPS18P62269 152 aaKnown RBP11.8□□□□□ -0.52
MARK3-221ENST00000560603 TUBB4BP68371 445 aa11.8□□□□□ -0.52
MARK3-221ENST00000560603 IFI35P80217 286 aaPredicted RBP11.8□□□□□ -0.52
MARK3-221ENST00000560603 GBE1Q04446 702 aa11.8□□□□□ -0.52
MARK3-221ENST00000560603 CDK18Q07002 472 aa11.8□□□□□ -0.52
MARK3-221ENST00000560603 CHAF1BQ13112 559 aa11.8□□□□□ -0.52
MARK3-221ENST00000560603 TUBB2AQ13885 445 aa11.8□□□□□ -0.52
MARK3-221ENST00000560603 KCNAB1Q14722 419 aa11.8□□□□□ -0.52
MARK3-221ENST00000560603 DNTTIP2Q5QJE6 756 aaKnown RBP11.8□□□□□ -0.52
MARK3-221ENST00000560603 ZDHHC20Q5W0Z9 365 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms