RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 CBX6O95503 412 aa17.48■□□□□ 0.39
TSPAN3-208ENST00000560514 FERP16591 822 aa17.48■□□□□ 0.39
TSPAN3-208ENST00000560514 POU3F2P20265 443 aaPredicted RBP17.48■□□□□ 0.39
TSPAN3-208ENST00000560514 ZNF165P49910 485 aa17.48■□□□□ 0.39
TSPAN3-208ENST00000560514 BOLA3Q53S33 107 aa17.48■□□□□ 0.39
TSPAN3-208ENST00000560514 IZUMO3Q5VZ72 239 aa17.48■□□□□ 0.39
TSPAN3-208ENST00000560514 ALS2CLQ60I27 953 aa17.48■□□□□ 0.39
TSPAN3-208ENST00000560514 TIGD7Q6NT04 549 aaPredicted RBP17.48■□□□□ 0.39
TSPAN3-208ENST00000560514 ABRAXAS1Q6UWZ7 409 aa17.48■□□□□ 0.39
TSPAN3-208ENST00000560514 KMT5CQ86Y97 462 aa17.48■□□□□ 0.39
TSPAN3-208ENST00000560514 TTC30BQ8N4P2 665 aa17.48■□□□□ 0.39
TSPAN3-208ENST00000560514 TIMM29Q9BSF4 260 aa17.48■□□□□ 0.39
TSPAN3-208ENST00000560514 ASF1BQ9NVP2 202 aa17.48■□□□□ 0.39
TSPAN3-208ENST00000560514 TAS2R14Q9NYV8 317 aa17.48■□□□□ 0.39
TSPAN3-208ENST00000560514 TRIM10Q9UDY6 481 aa17.48■□□□□ 0.39
TSPAN3-208ENST00000560514 SLC23A2Q9UGH3 650 aa17.48■□□□□ 0.39
TSPAN3-208ENST00000560514 C2CD3Q4AC94 2353 aa17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 GOLGA6L22H0YM25 854 aa17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 CHUKO15111 745 aa17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 HNRNPRO43390 633 aaKnown RBP17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 JCHAINP01591 159 aa17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 PCK1P35558 622 aa17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 VAV2P52735 878 aa17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 DRG2P55039 364 aaKnown RBP17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 ITGA1P56199 1179 aa17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 GSDMDP57764 484 aa17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 CDK18Q07002 472 aa17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 PLCL1Q15111 1095 aa17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 DNTTIP2Q5QJE6 756 aaKnown RBP17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 ADGRG6Q86SQ4 1221 aa17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 CISD2Q8N5K1 135 aaKnown RBP17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 ZSCAN5AQ9BUG6 496 aa17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 CHST8Q9H2A9 424 aa17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 RBM22Q9NW64 420 aaKnown RBP eCLIP17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 TMEM63CQ9P1W3 806 aa17.47■□□□□ 0.39
TSPAN3-208ENST00000560514 LGALS16A8MUM7 142 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 BRAFP15056 766 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 PPP1CAP62136 330 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 TUBB4BP68371 445 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 HSD11B2P80365 405 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 MYL5Q02045 173 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 LAMB3Q13751 1172 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 TUBB2AQ13885 445 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 KYNUQ16719 465 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 CCDC122Q5T0U0 273 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 TMTC4Q5T4D3 741 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 AGAP9Q5VTM2 703 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 WASH2PQ6VEQ5 465 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 ENDOVQ8N8Q3 282 aaKnown RBP17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 OR8K5Q8NH50 307 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 ADAMTS17Q8TE56 1095 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 GLYATL1Q969I3 302 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 MARVELD3Q96A59 401 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 ZNF653Q96CK0 615 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 SGSM3Q96HU1 749 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 ERGIC2Q96RQ1 377 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 CD180Q99467 661 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 SMAD5Q99717 465 aaKnown RBP17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 MAP3K3Q99759 626 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 TUBB2BQ9BVA1 445 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 ADGRE3Q9BY15 652 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 TRIM7Q9C029 511 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 ILKAPQ9H0C8 392 aaPredicted RBP17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 ZFYVE1Q9HBF4 777 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 RAD18Q9NS91 495 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 KCND1Q9NSA2 647 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 SEMA5BQ9P283 1151 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 C5AR2Q9P296 337 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 AMACRQ9UHK6 382 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 SCINQ9Y6U3 715 aa17.46■□□□□ 0.39
TSPAN3-208ENST00000560514 ARHGAP10A1A4S6 786 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 ANKRD66B4E2M5 251 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 VEGFDO43915 354 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 CDK14O94921 469 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 PRLP01236 227 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 RAB40ALP0C0E4 278 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 CDK11BP21127 795 aaKnown RBP17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 IL4RP24394 825 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 PER3P56645 1201 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 GPS2Q13227 327 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 RAPSNQ13702 412 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 GTF2H3Q13889 308 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 KRT81Q14533 505 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 PLEKHN1Q494U1 663 aaPredicted RBP17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 VWA5B1Q5TIE3 1220 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 LYPLAL1Q5VWZ2 237 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 PDPK2PQ6A1A2 396 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 ALG1LQ6GMV1 187 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 GLIS1Q8NBF1 620 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 CPT1BQ92523 772 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 CLIP3Q96DZ5 547 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 RUBCNLQ9H714 662 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 FANCEQ9HB96 536 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 MRPL47Q9HD33 250 aaKnown RBP17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 TCFL5Q9UL49 500 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 B3GNT3Q9Y2A9 372 aa17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 DIDO1Q9BTC0 2240 aaKnown RBP17.45■□□□□ 0.38
TSPAN3-208ENST00000560514 TLCD2A6NGC4 264 aa17.44■□□□□ 0.38
TSPAN3-208ENST00000560514 F5H423 210 aaPredicted RBP17.44■□□□□ 0.38
TSPAN3-208ENST00000560514 MATN3O15232 486 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms