RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 POLG2Q9UHN1 485 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 FIS1Q9Y3D6 152 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 OARD1Q9Y530 152 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 GPR45Q9Y5Y3 372 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 IRAK3Q9Y616 596 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 SRCAPQ6ZRS2 3230 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 PLXNB3Q9ULL4 1909 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 A0A1W2PP18 115 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 NPEPPSL1A6NEC2 478 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 E7ENX8 843 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 CDC7O00311 574 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 LCE2BO14633 110 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 KIAA0355O15063 1070 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 TEX28O15482 410 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 NIPSNAP2O75323 286 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 SIX3O95343 332 aaPredicted RBP9.59□□□□□ -0.87
RTF1-206ENST00000560447 OTCP00480 354 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 TIMP1P01033 207 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 CKMP06732 381 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 LYNP07948 512 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 ALDOCP09972 364 aaKnown RBP9.59□□□□□ -0.87
RTF1-206ENST00000560447 TCF3P15923 654 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 ACRV1P26436 265 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 GABRR2P28476 465 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 SPAM1P38567 509 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 DPP6P42658 865 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 CDH13P55290 713 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 WDR5P61964 334 aaKnown RBP9.59□□□□□ -0.87
RTF1-206ENST00000560447 MAD2L1Q13257 205 aaPredicted RBP9.59□□□□□ -0.87
RTF1-206ENST00000560447 NFATC2Q13469 925 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 GRM2Q14416 872 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 RPS6KA2Q15349 733 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 TGFBIQ15582 683 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 CDKN3Q16667 212 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 PPP1R3AQ16821 1122 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 PTRHD1Q6GMV3 140 aaKnown RBP9.59□□□□□ -0.87
RTF1-206ENST00000560447 SULT1C3Q6IMI6 304 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 FRA10AC1Q70Z53 315 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 TAS2R42Q7RTR8 314 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 LYSMD3Q7Z3D4 306 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 SERPINA9Q86WD7 417 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 DDIASQ8IXT1 998 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 MARVELD2Q8N4S9 558 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 PCDH20Q8N6Y1 951 aaKnown RBP9.59□□□□□ -0.87
RTF1-206ENST00000560447 LEMD2Q8NC56 503 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 OR2AP1Q8NGE2 309 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 SH3RF2Q8TEC5 729 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 DDI1Q8WTU0 396 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 EXT2Q93063 718 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 POP5Q969H6 163 aaKnown RBP9.59□□□□□ -0.87
RTF1-206ENST00000560447 ECHDC3Q96DC8 303 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 LMLNQ96KR4 655 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 MARK4Q96L34 752 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 MAGEB10Q96LZ2 347 aaPredicted RBP9.59□□□□□ -0.87
RTF1-206ENST00000560447 C3orf30Q96M34 536 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 ZNF641Q96N77 438 aaPredicted RBP9.59□□□□□ -0.87
RTF1-206ENST00000560447 PLEKHG4BQ96PX9 1271 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 MCCC1Q96RQ3 725 aaPredicted RBP9.59□□□□□ -0.87
RTF1-206ENST00000560447 HEBP1Q9NRV9 189 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 RAD18Q9NS91 495 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 ARMC1Q9NVT9 282 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 SMPD4Q9NXE4 827 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 PLK2Q9NYY3 685 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 CD274Q9NZQ7 290 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 NDUFA13Q9P0J0 144 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 LZTS1Q9Y250 596 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 HS3ST2Q9Y278 367 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 AP3M1Q9Y2T2 418 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 FCF1Q9Y324 198 aaKnown RBP9.59□□□□□ -0.87
RTF1-206ENST00000560447 ST14Q9Y5Y6 855 aa9.59□□□□□ -0.87
RTF1-206ENST00000560447 BPTFQ12830 3046 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 GLYATL1P3A0A0U1RQE8 302 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 FAM234BA2RU67 622 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 E2F3O00716 465 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 GAPDHSO14556 408 aaPredicted RBP9.58□□□□□ -0.88
RTF1-206ENST00000560447 GRM6O15303 877 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 EEDO75530 441 aaKnown RBP9.58□□□□□ -0.88
RTF1-206ENST00000560447 SORBS2O94875 1100 aaKnown RBP9.58□□□□□ -0.88
RTF1-206ENST00000560447 PRAMEF1O95521 474 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 ENO2P09104 434 aaPredicted RBP9.58□□□□□ -0.88
RTF1-206ENST00000560447 PRSS56P0CW18 603 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 HGFP14210 728 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 VCLP18206 1134 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 PEX2P28328 305 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 NSG1P42857 185 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 EPHA5P54756 1037 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 SH3BGRP55822 239 aaPredicted RBP9.58□□□□□ -0.88
RTF1-206ENST00000560447 EEFSECP57772 596 aaKnown RBP9.58□□□□□ -0.88
RTF1-206ENST00000560447 KCNK10P57789 538 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 MRPS22P82650 360 aaKnown RBP9.58□□□□□ -0.88
RTF1-206ENST00000560447 CDKL1Q00532 357 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 MS4A2Q01362 244 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 LMAN2Q12907 356 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 RCAN2Q14206 197 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 GRAMD1BQ3KR37 738 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 SFT2D3Q587I9 215 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 TXNDC8Q6A555 127 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 LCN8Q6JVE9 175 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 PAOXQ6QHF9 649 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 SBSNQ6UWP8 590 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms