RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 BBS5Q8N3I7 341 aa12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 ST6GALNAC3Q8NDV1 305 aa12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 MLPHQ9BV36 600 aaPredicted RBP12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 FAM83DQ9H4H8 585 aa12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 ETNK2Q9NVF9 386 aa12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 TCFL5Q9UL49 500 aa12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 DNAJC16Q9Y2G8 782 aa12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 COPG1Q9Y678 874 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 PDZK1P1A8MUH7 402 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 EPHB6O15197 1021 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 LRRTM2O43300 516 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 ZG16O60844 167 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 SCRG1O75711 98 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 PRLP01236 227 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 RAB40ALP0C0E4 278 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 PSMA2P25787 234 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 RPL10P27635 214 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 EPHB1P54762 984 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 POLR2FP61218 127 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 ATP1A4Q13733 1029 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 TDRD12Q587J7 1177 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 PLEKHS1Q5SXH7 462 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 MARC1Q5VT66 337 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 ADGRG6Q86SQ4 1221 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 TMEM126BQ8IUX1 230 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 UBE2Q2Q8WVN8 375 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 LRFN5Q96NI6 719 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 LYSMD1Q96S90 227 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 MAP3K3Q99759 626 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 NLNQ9BYT8 704 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 NT5MQ9NPB1 228 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 NLRC4Q9NPP4 1024 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 ANO10Q9NW15 660 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 FANCLQ9NW38 375 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 DTLQ9NZJ0 730 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 DNPEPQ9ULA0 475 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 CHKBQ9Y259 395 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 PCDHGA10Q9Y5H3 936 aa12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 SNRNP200O75643 2136 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-213ENST00000560127 PRSS44E7EML9 344 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 CHUKO15111 745 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 MTA2O94776 668 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 KLK3P07288 261 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 CAPN1P07384 714 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 ZNF7P17097 686 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 DESP17661 470 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 AMPD1P23109 780 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 MIPP30301 263 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 RRADP55042 308 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 CDH6P55285 790 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 PER3P56645 1201 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 TUBB4BP68371 445 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 TUBB2AQ13885 445 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 KRT31Q15323 416 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 GPR19Q15760 415 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 INSCQ1MX18 579 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 ZXDCQ2QGD7 858 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 ANO6Q4KMQ2 910 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 TCP11X2Q5H9J9 407 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 PRAMEF17Q5VTA0 474 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 IGFL3Q6UXB1 125 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 WASH2PQ6VEQ5 465 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 RBM12BQ8IXT5 1001 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 DSELQ8IZU8 1212 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 D2HGDHQ8N465 521 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 ATPAF2Q8N5M1 289 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 TEX26Q8N6G2 289 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 ZNF501Q96CX3 271 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 CXorf40BQ96DE9 158 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 PCMTD1Q96MG8 357 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 TIMM29Q9BSF4 260 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 TUBB2BQ9BVA1 445 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 TDRD1Q9BXT4 1180 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 ILKAPQ9H0C8 392 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 TRIM39Q9HCM9 518 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 SEPT11Q9NVA2 429 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 TAB2Q9NYJ8 693 aa12.54□□□□□ -0.4
RABGGTA-213ENST00000560127 C1orf232A0A0U1RR37 186 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 GPR89AB7ZAQ6 455 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 MEN1O00255 615 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 GPR89BP0CG08 455 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 IL4RP24394 825 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 ITGA3P26006 1051 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 CA5AP35218 305 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 RORAP35398 523 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 GLRBP48167 497 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 ZNF135P52742 658 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 DRG2P55039 364 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 GSDMDP57764 484 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 HSD11B2P80365 405 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 MAMLD1Q13495 774 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 KYNUQ16719 465 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 AGAP9Q5VTM2 703 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 LYPLAL1Q5VWZ2 237 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 SASS6Q6UVJ0 657 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 FAM198BQ6UWH4 519 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 CUZD1Q86UP6 607 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 KMT5CQ86Y97 462 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 PSTKQ8IV42 348 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 ZNF547Q8IVP9 402 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms