RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 NT5DC3Q86UY8 548 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 RASGRP3Q8IV61 690 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 CPLX3Q8WVH0 158 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 KLHL6Q8WZ60 621 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 STAMBPL1Q96FJ0 436 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 PACSIN1Q9BY11 444 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 GPR63Q9BZJ6 419 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 SEMA5BQ9P283 1151 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 EPHA6Q9UF33 1036 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 TMPRSS11EQ9UL52 423 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 DNAJC16Q9Y2G8 782 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 PCDHGA6Q9Y5G7 932 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 LRRD1A4D1F6 860 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 OR52A4PA6NMU1 304 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 MKRN2OSH3BPM6 223 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 PPP1R12AO14974 1030 aaPredicted RBP12.86□□□□□ -0.35
TPM1-220ENST00000559556 KIF1CO43896 1103 aaKnown RBP12.86□□□□□ -0.35
TPM1-220ENST00000559556 MTX2O75431 263 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 RASSF9O75901 435 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 CDK14O94921 469 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 NDST3O95803 873 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 RECKO95980 971 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 NELFEP18615 380 aaKnown RBP12.86□□□□□ -0.35
TPM1-220ENST00000559556 IDSP22304 550 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 RPL10P27635 214 aaKnown RBP12.86□□□□□ -0.35
TPM1-220ENST00000559556 CD97P48960 835 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 TPM4P67936 248 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 CDK18Q07002 472 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 PDK1Q15118 436 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 PCSK7Q16549 785 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 SLC18A3Q16572 532 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.86□□□□□ -0.35
TPM1-220ENST00000559556 ZFYVE27Q5T4F4 411 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 CACHD1Q5VU97 1274 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 CYB5D1Q6P9G0 228 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 MIB2Q96AX9 1013 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 CXorf40BQ96DE9 158 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 ZDHHC12Q96GR4 267 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 AGAP3Q96P47 875 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 SRPK1Q96SB4 655 aaKnown RBP12.86□□□□□ -0.35
TPM1-220ENST00000559556 XPO4Q9C0E2 1151 aaKnown RBP12.86□□□□□ -0.35
TPM1-220ENST00000559556 CBX8Q9HC52 389 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 LNPEPQ9UIQ6 1025 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 KCND3Q9UK17 655 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 ABCA12Q86UK0 2595 aa12.86□□□□□ -0.35
TPM1-220ENST00000559556 APOL1O14791 398 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 SPAG6O75602 509 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 RFPL1O75677 317 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 MT-CYBP00156 380 aaPredicted RBP12.85□□□□□ -0.35
TPM1-220ENST00000559556 MT-ND3P03897 115 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 NTRK1P04629 796 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 GP1BBP13224 206 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 VCLP18206 1134 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 NR1D1P20393 614 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 PMS2P54278 862 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 DRG2P55039 364 aaKnown RBP12.85□□□□□ -0.35
TPM1-220ENST00000559556 DMPKQ09013 629 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 DNASE1L3Q13609 305 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 ERV3-1Q14264 604 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 ATP13A5Q4VNC0 1218 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 FAM182AQ5T1J6 154 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 NPNTQ6UXI9 565 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 LUZP1Q86V48 1076 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 PPP1R3BQ86XI6 285 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 TRAPPC5Q8IUR0 188 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 SPATA22Q8NHS9 363 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.85□□□□□ -0.35
TPM1-220ENST00000559556 RNF31Q96EP0 1072 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 PLAAQ9Y263 795 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 SPO11Q9Y5K1 396 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 PCSK5Q92824 1860 aa12.85□□□□□ -0.35
TPM1-220ENST00000559556 A0A0A6YYK5 440 aaPredicted RBP12.84□□□□□ -0.35
TPM1-220ENST00000559556 C21orf140B9A014 251 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 K7EM74 188 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 AURKAO14965 403 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 KCNJ13O60928 360 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 CREG1O75629 220 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 TIAF1O95411 115 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 TMEM253P0C7T8 217 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 CCNYL3P0C7X3 344 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 ZFXP17010 805 aaPredicted RBP12.84□□□□□ -0.35
TPM1-220ENST00000559556 FECHP22830 423 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 CASP14P31944 242 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 HMGCLP35914 325 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 PPP1CAP62136 330 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 TMEM115Q12893 351 aaPredicted RBP12.84□□□□□ -0.35
TPM1-220ENST00000559556 MESDQ14696 234 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 ASTE1Q2TB18 679 aaPredicted RBP12.84□□□□□ -0.35
TPM1-220ENST00000559556 TEX44Q53QW1 395 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 IRGCQ6NXR0 463 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 FAM92BQ6ZTR7 304 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 APLFQ8IW19 511 aaPredicted RBP12.84□□□□□ -0.35
TPM1-220ENST00000559556 FAM26EQ8N5C1 309 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 GPR150Q8NGU9 434 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 DTX3LQ8TDB6 740 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 UBXN4Q92575 508 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 SLC41A2Q96JW4 573 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 FCRL4Q96PJ5 515 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 GLOD4Q9HC38 313 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 LHX9Q9NQ69 397 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms