RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 NCKIPSDQ9NZQ3 722 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 LRIT1Q9P2V4 623 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 FAM8A1Q9UBU6 413 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 RIMKLBQ9ULI2 386 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 NEUROG3Q9Y4Z2 214 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 DNALI1O14645 258 aaPredicted RBP18.4■□□□□ 0.54
CASC4-209ENST00000559222 F7P08709 466 aaPredicted RBP18.4■□□□□ 0.54
CASC4-209ENST00000559222 BRAFP15056 766 aa18.4■□□□□ 0.54
CASC4-209ENST00000559222 PAFAH1B1P43034 410 aa18.4■□□□□ 0.54
CASC4-209ENST00000559222 NPY2RP49146 381 aa18.4■□□□□ 0.54
CASC4-209ENST00000559222 PDX1P52945 283 aa18.4■□□□□ 0.54
CASC4-209ENST00000559222 DRG2P55039 364 aaKnown RBP18.4■□□□□ 0.54
CASC4-209ENST00000559222 DR1Q01658 176 aa18.4■□□□□ 0.54
CASC4-209ENST00000559222 IZUMO3Q5VZ72 239 aa18.4■□□□□ 0.54
CASC4-209ENST00000559222 CCNI2Q6ZMN8 369 aaPredicted RBP18.4■□□□□ 0.54
CASC4-209ENST00000559222 SFRP1Q8N474 314 aa18.4■□□□□ 0.54
CASC4-209ENST00000559222 CLDN19Q8N6F1 224 aa18.4■□□□□ 0.54
CASC4-209ENST00000559222 NAT6Q93015 286 aa18.4■□□□□ 0.54
CASC4-209ENST00000559222 PWWP2AQ96N64 755 aa18.4■□□□□ 0.54
CASC4-209ENST00000559222 COPS8Q99627 209 aa18.4■□□□□ 0.54
CASC4-209ENST00000559222 ZCCHC2Q9C0B9 1178 aaKnown RBP18.4■□□□□ 0.54
CASC4-209ENST00000559222 IL22Q9GZX6 179 aa18.4■□□□□ 0.54
CASC4-209ENST00000559222 IL1RAPL1Q9NZN1 696 aa18.4■□□□□ 0.54
CASC4-209ENST00000559222 BFARQ9NZS9 450 aa18.4■□□□□ 0.54
CASC4-209ENST00000559222 WDR37Q9Y2I8 494 aa18.4■□□□□ 0.54
CASC4-209ENST00000559222 KIF26BQ2KJY2 2108 aa18.4■□□□□ 0.54
CASC4-209ENST00000559222 ZFHX4Q86UP3 3567 aa18.4■□□□□ 0.54
CASC4-209ENST00000559222 CCDC188H7C350 402 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 OR1I1O60431 355 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 MT-CO3P00414 261 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 GLB1P16278 677 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 RPL10P27635 214 aaKnown RBP18.39■□□□□ 0.53
CASC4-209ENST00000559222 MAGEA3P43357 314 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 CLCNKAP51800 687 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 OR1D5P58170 312 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 TARDBPQ13148 414 aaKnown RBP eCLIP18.39■□□□□ 0.53
CASC4-209ENST00000559222 GPR33Q49SQ1 333 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 IYDQ6PHW0 289 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 AFTPHQ6ULP2 937 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 TMPRSS9Q7Z410 1059 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 ZNF438Q7Z4V0 828 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 SPRED1Q7Z699 444 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 CCNJLQ8IV13 435 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 PPIL6Q8IXY8 311 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 MCUQ8NE86 351 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 SPATA4Q8NEY3 305 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 OR6P1Q8NGX9 317 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 GATA6Q92908 595 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 FCRL3Q96P31 734 aaPredicted RBP18.39■□□□□ 0.53
CASC4-209ENST00000559222 KIFC1Q9BW19 673 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 TRIM31Q9BZY9 425 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 EVA1BQ9NVM1 165 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 ATXN7L1Q9ULK2 861 aaPredicted RBP18.39■□□□□ 0.53
CASC4-209ENST00000559222 SOX13Q9UN79 622 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 PCDHB1Q9Y5F3 818 aa18.39■□□□□ 0.53
CASC4-209ENST00000559222 FAM221BA6H8Z2 402 aa18.38■□□□□ 0.53
CASC4-209ENST00000559222 C1QTNF9BB2RNN3 333 aa18.38■□□□□ 0.53
CASC4-209ENST00000559222 GOLGA8KD6RF30 607 aa18.38■□□□□ 0.53
CASC4-209ENST00000559222 GOLGA8TH3BQL2 631 aa18.38■□□□□ 0.53
CASC4-209ENST00000559222 NTN3O00634 580 aaPredicted RBP18.38■□□□□ 0.53
CASC4-209ENST00000559222 TP73O15350 636 aa18.38■□□□□ 0.53
CASC4-209ENST00000559222 B4GAT1O43505 415 aa18.38■□□□□ 0.53
CASC4-209ENST00000559222 RPLP0P05388 317 aaKnown RBP18.38■□□□□ 0.53
CASC4-209ENST00000559222 C1QTNF9P0C862 333 aa18.38■□□□□ 0.53
CASC4-209ENST00000559222 F3P13726 295 aa18.38■□□□□ 0.53
CASC4-209ENST00000559222 E2F1Q01094 437 aa18.38■□□□□ 0.53
CASC4-209ENST00000559222 CAMK2BQ13554 666 aa18.38■□□□□ 0.53
CASC4-209ENST00000559222 ZNF658BQ4V348 819 aaPredicted RBP18.38■□□□□ 0.53
CASC4-209ENST00000559222 BCL7AQ4VC05 210 aa18.38■□□□□ 0.53
CASC4-209ENST00000559222 MSS51Q4VC12 460 aa18.38■□□□□ 0.53
CASC4-209ENST00000559222 TMPRSS12Q86WS5 348 aa18.38■□□□□ 0.53
CASC4-209ENST00000559222 OR4L1Q8NH43 312 aa18.38■□□□□ 0.53
CASC4-209ENST00000559222 DCUN1D1Q96GG9 259 aa18.38■□□□□ 0.53
CASC4-209ENST00000559222 ZNF624Q9P2J8 865 aaPredicted RBP18.38■□□□□ 0.53
CASC4-209ENST00000559222 RNF14Q9UBS8 474 aa18.38■□□□□ 0.53
CASC4-209ENST00000559222 PSMD13Q9UNM6 376 aa18.38■□□□□ 0.53
CASC4-209ENST00000559222 MSRB2Q9Y3D2 182 aa18.38■□□□□ 0.53
CASC4-209ENST00000559222 PMS2P1A4D2B8 440 aa18.37■□□□□ 0.53
CASC4-209ENST00000559222 OR52A4PA6NMU1 304 aa18.37■□□□□ 0.53
CASC4-209ENST00000559222 PDZK1P1A8MUH7 402 aa18.37■□□□□ 0.53
CASC4-209ENST00000559222 NUDT21O43809 227 aaKnown RBP18.37■□□□□ 0.53
CASC4-209ENST00000559222 ATP1B2P14415 290 aaPredicted RBP18.37■□□□□ 0.53
CASC4-209ENST00000559222 PRLHRP49683 370 aa18.37■□□□□ 0.53
CASC4-209ENST00000559222 PRAMEP78395 509 aa18.37■□□□□ 0.53
CASC4-209ENST00000559222 CLCA4Q14CN2 919 aa18.37■□□□□ 0.53
CASC4-209ENST00000559222 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.37■□□□□ 0.53
CASC4-209ENST00000559222 NLRP9Q7RTR0 991 aa18.37■□□□□ 0.53
CASC4-209ENST00000559222 B3GNT8Q7Z7M8 397 aa18.37■□□□□ 0.53
CASC4-209ENST00000559222 AMZ2Q86W34 360 aa18.37■□□□□ 0.53
CASC4-209ENST00000559222 GALNT15Q8N3T1 639 aa18.37■□□□□ 0.53
CASC4-209ENST00000559222 DCBLD1Q8N8Z6 715 aa18.37■□□□□ 0.53
CASC4-209ENST00000559222 LKAAEAR1Q8TD35 194 aa18.37■□□□□ 0.53
CASC4-209ENST00000559222 SIGLEC10Q96LC7 697 aa18.37■□□□□ 0.53
CASC4-209ENST00000559222 WDR83Q9BRX9 315 aaKnown RBP18.37■□□□□ 0.53
CASC4-209ENST00000559222 MRM3Q9HC36 420 aaKnown RBP18.37■□□□□ 0.53
CASC4-209ENST00000559222 CLCA2Q9UQC9 943 aa18.37■□□□□ 0.53
CASC4-209ENST00000559222 FRYQ5TBA9 3013 aa18.37■□□□□ 0.53
CASC4-209ENST00000559222 A0A1W2PNU3 283 aaPredicted RBP18.36■□□□□ 0.53
CASC4-209ENST00000559222 RHPN2P1A8MT19 583 aa18.36■□□□□ 0.53
CASC4-209ENST00000559222 RAD51CO43502 376 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms